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Schema
Citing CMDGA
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Annotation type
13
candidate regulatory elements
12
gene expression
10
target gene predictions
9
chromatin state
7
eQTL
4
accessible chromatin
2
histone modifications
1
binding sites
1
caQTL
1
differential activity
Annotation Category
1
Gene expression levels
Annotation type Category
1
RNA-seq
Available data
1
tsv
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
7
induced pluripotent stem cell
3
EndoC_BH1
3
pancreatic MUC5B+ductal cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic alpha+beta cell
3
pancreatic beta cell
3
pancreatic cycling alpha cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
pancreatic stellate cell
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
T Cell
2
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
1
aorta wall
1
liver
1
skeletal muscle
1
subcutaneous adipose tissue
1
visceral abdominal adipose tissue
Disease term
1
coronary artery disease
Organ
1
liver
Life stage
1
adult
Date released
1
February, 2024
Software used
1
deseq2
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
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Download
FileSet
DSR054IUR
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP