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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
1
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
primary cell
4
cell line
Biosample term
21
stomach
18
heart
17
lung
17
muscle of arm
15
kidney
15
muscle of back
14
adrenal gland
14
large intestine
14
muscle of leg
14
small intestine
13
brain
13
left lung
12
placenta
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
spleen
9
thymus
7
spinal cord
6
H9
6
heart left ventricle
6
liver
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
MCF-7
4
Peyer's patch
4
WI38
4
body of pancreas
4
chorionic villus
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
ovary
4
right renal pelvis
4
testis
4
thyroid gland
4
transverse colon
4
upper lobe of left lung
3
A549
3
MCF 10A
3
breast epithelium
3
cardiac muscle cell
3
endocrine pancreas
3
esophagus muscularis mucosa
3
heart right ventricle
3
layer of hippocampus
3
mesodermal cell
3
omental fat pad
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
2
22Rv1
2
AG10803
2
HEK293
2
HeLa-S3
2
LNCAP
2
NAMALWA
2
SK-N-DZ
2
SK-N-SH
2
adipocyte
2
angular gyrus
2
aorta
2
ascending aorta
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
eye
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
neural cell
2
neuroepithelial stem cell
2
neuronal stem cell
2
placental basal plate
2
prostate gland
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
trophoblast
2
uterus
2
vagina
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
Ammon's horn
1
BE2C
1
BJ
1
C4-2B
1
CMK
1
Caco-2
1
Caki2
1
D721Med
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12864
1
GM12865
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM13976
1
GM13977
1
GM20000
1
GM23248
1
GM23338
1
H1
1
H4
1
H54
1
H7
1
HAP-1
1
HCEC 1CT
1
HCT116
1
HFF-Myc
1
HK-2
1
HL-60
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
IMR-90
1
Ishikawa
1
Jurkat, Clone E6-1
1
K562
1
KBM-7
1
KMS-11
1
KOPT-K1
1
Karpas-422
1
L1-S8
1
LHCN-M2
1
LNCaP clone FGC
1
LoVo
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226
1
NCI-H460
1
NCI-H929
1
NT2/D1
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC
1
RCC 7860
1
RKO
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
Organ
4
lung
Life stage
4
unknown
Date released
4
February, 2021
Software used
4
encode-ccres
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
software_used.software.name!
r
biosample_type!
primary cell
Showing 4 of 4 results
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Download
FileSet
DSR965GFJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR786NMP
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR612TGV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR729GNY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
Lab:
AMP-T2D consortium
Project:
AMP