Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
53
HeLa-S3
51
H1-hESC
39
neural progenitor cell
36
kidney
32
CD8-positive, alpha-beta T cell
32
endothelial cell
31
heart
30
fibroblast
29
macrophage
29
monocyte
28
islet of Langerhans
25
brain
23
EndoC_BH1
23
pancreatic ductal cell
22
K562
22
stomach
21
smooth muscle cell
20
breast cancer cell
19
HFFc6
19
adipocyte
19
muscle of arm
19
muscle of leg
19
pericyte cell
18
embryonic stem cell
18
placenta
17
large intestine
17
liver
17
lung
16
CD14-positive monocyte
16
induced pluripotent stem cell
16
small intestine
15
B cell
15
keratinocyte
15
muscle of back
14
astrocyte
14
cardiac muscle cell
14
pancreatic acinar cell
14
spinal cord
14
thymus
13
H9
13
endothelial cell of umbilical vein
13
excitatory neuron
13
left lung
13
renal cortex interstitium
13
renal pelvis
13
retinal pigment epithelial cell
12
adrenal gland
12
foreskin fibroblast
12
hepatocyte
12
lymphoblastoid cell line
12
neuroblastoma cell
12
pancreatic beta cell
12
regulatory T cell
12
right lung
11
GM12878
11
T cell
11
erythroblast
11
osteoblast
10
Rhabdomyosarcoma
10
gastric cancer cell
10
heart left ventricle
10
neuronal stem cell
10
pancreatic delta cell
10
progenitor cell of endocrine pancreas
10
right kidney
9
HepG2
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
mammary epithelial cell
9
mesenchymal stem cell
9
pancreatic alpha cell
8
B-lymphoblastoid cell line
8
T-helper 17 cell
8
fibroblast cell line
8
foreskin keratinocyte
8
left cardiac atrium
8
pancreatic stellate cell
8
pituitary stalk
8
skeletal muscle fiber
8
skeletal muscle myoblast
7
CD4-positive helper T cell
7
CD4-positive, alpha-beta T cell
7
Jurkat
7
MCF-7
7
T-helper 1 cell
7
T-helper 2 cell
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
memory B cell
7
natural killer cell
7
pancreas
7
skeletal muscle satellite cell
6
Chondroid Chordoma
6
HEK293
6
HUES8
6
IMR-90
6
Rh-4 cell
6
SGBS preadipocytes
6
T-cell acute lymphoblastic leukemia
6
adipose tissue
6
bronchial epithelial cell
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
fibroblast of cardiac tissue
6
hESC cell
6
iPSC derived cell line
6
left kidney
6
lymphocyte
6
mammary gland epithelial cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
retina
6
testis
6
trophoblast cell
6
type I muscle cell
5
A549
5
CD4-positive, alpha-beta memory T cell
5
CyT49
5
Ewing sarcoma
5
GM06990
5
GM12864
5
GM12865
5
GM19240
5
HCT-116 cell
5
KARPAS-422 cell
5
PC-9
5
SK-N-MC
5
T follicular helper cell
5
U937
5
acute myeloid leukemia
5
choroid plexus epithelial cell
5
coronary artery
5
enterocyte
5
glomerular endothelial cell
5
heart right ventricle
5
mesendoderm
5
osteosarcoma
5
prostate cancer cell line
5
skin fibroblast
5
smooth muscle cell of the coronary artery
5
spleen
4
22Rv1
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
BE(2)-C
4
BJ cell
4
CD1c-positive myeloid dendritic cell
4
CMK
4
COLO205
4
Caco-2 cell
4
GM12873
4
GM12875
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
HAC cell
4
HAP-1
4
HBMEC cell
4
HL-60
4
HS-SY-2 cell
4
HT-29
4
LNCAP
4
LoVo cell
4
MDA-MB-231 cell
4
MG63
4
MM.1S
4
Mantle cell lymphoma
4
NCCIT cell
4
NHEK
4
NT2-D1 cell
4
Normal Human Astrocytes
4
OCI-LY7
4
PANC-1 cell
4
RS4-11 cell
4
SK-N-DZ
4
SK-N-SH
4
SK-N-SH_RA
4
U2OS
4
WERI-Rb-1
4
acute myeloid leukemia cell
4
cardiomyocytes (cardiac muscle cell)
4
colon epithelial cell
4
cortical cell of adrenal gland
4
diffuse large B-cell lymphoma
4
erythroid cell
4
esophageal squamous cell carcinoma
4
foreskin melanocyte
4
glutamatergic neuron
4
hepatic stellate cell
4
left renal cortex interstitium
4
left renal pelvis
4
mast cell
Life stage
adult
4
unknown
Date released
September, 2022
4
February, 2021
1
May, 2021
Software used
4
encode-ccres
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
relevant_life_stage!
adult
month_released!
September, 2022
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR886SSA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE common myeloid progenitor, CD34-positive
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR086DXU
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE common myeloid progenitor, CD34-positive
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR315FAY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE common myeloid progenitor, CD34-positive
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR671QLV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE common myeloid progenitor, CD34-positive
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR199UUA
released
Annotation file set
: enhancer-gene predicton of CD34-positive_mobilized-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP