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Schema
Citing CMDGA
Clear Filters
Annotation type
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Target gene links
Annotation type Category
8
ChIP-seq
6
ATAC-seq
1
RNA-seq
1
pCHi-C
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
30
islet of Langerhans
21
monocyte
16
induced pluripotent stem cell
15
subcutaneous adipose tissue
11
EndoC_BH1
11
cardiomyocytes
10
hepatocyte
9
regulatory T cell
8
H1-hESC
8
T-helper 1 cell
8
kidney
8
macrophage
8
neural progenitor cell
7
T-helper 17 cell
7
cerebellum
7
frontal cortex
7
liver
7
omental fat pad
7
putamen
7
right atrium auricular region
7
substantia nigra
7
tibial nerve
6
Ammon's horn
6
adipose tissue
6
amygdala
6
anterior cingulate cortex
6
body of pancreas
6
caudate nucleus
6
coronary artery
6
hypothalamus
6
lymphoblastoid cell line
6
nucleus accumbens
6
tibial artery
5
C1 segment of cervical spinal cord
5
ascending aorta
5
cerebellum (Hemisphere)
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
right lobe of liver
4
T-helper 2 cell
4
cardiac precursors (cardiac muscle cell)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell
4
endothelial cell of hepatic sinusoid
4
neutrophil
4
visceral abdominal adipose tissue
3
B cell
3
CD8-positive, alpha-beta T cell
3
T follicular helper cell
3
adrenal gland
3
blood cell
3
bone tissue
3
brain
3
cardiomyocytes (cardiac muscle cell)
3
central memory CD8-positive, alpha-beta T cell
3
dorsolateral prefrontal cortex
3
effector memory CD8-positive, alpha-beta T cell
3
heart left ventricle
3
lung
3
memory B cell
3
naive B cel
3
ovary
3
skeletal muscle tissue
3
skin of body
3
spleen
2
CD4-positive, alpha-beta T cell
2
T cell
2
activated CD4-positive, alpha-beta T cell
2
articular chondrocyte
2
blood
2
cartilage tissue
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
embryonic stem cell
2
esophagus
2
fibroblast
2
gamma-delta T cell
2
heart
2
iPSC derived cell line
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
minor salivary gland
2
muscle
2
osteoblast
2
pancreas
2
retina
2
small intestine
2
smooth muscle cell
2
smooth muscle cell of the coronary artery
2
stomach
2
testis
2
thymus
2
uterus
2
vagina
1
B-1a B cell
1
B-lymphoblastoid cell line
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
HepG2
1
Leydig cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
S-shaped body
1
abdominal aorta artery
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
alternatively activated macrophage
1
aorta
1
aorta wall
1
astrocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle fibroblast
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellar hemisphere
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
cortex of kidney
1
diencephalon
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
erythroblast
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fallopian tube
1
fat cell
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
helper T cell
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney loop of Henle descending limb epithelial cell
1
kidney tubule cell
1
layer of hippocampus
1
lower motor neuron
1
lymphocyte of B lineage (iPSC)
1
megakaryocyte
1
mesangial cell
1
mesenchymal stem cell of adipose
1
mesendoderm
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
microglial cell
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
natural killer cell
1
nephron progenitor
1
nephron tubule
1
occipital lobe
1
pancreatic alpha cell
1
parietal lobe
1
pericardium fibroblast
1
pituitary
1
pituitary gland
1
placenta
1
progenitor cell
1
prostate
1
prostate gland
1
psoas muscle
1
renal cortical epithelial cell
1
renal glomerulus
1
right cardiac atrium
1
sensory neuron
1
sigmoid colon
1
skeletal muscle
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
Date released
1
March, 2020
1
May, 2021
Software used
1
nospecificsoft_customcode
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
histone modifications
Showing 2 of 2 results
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Download
FileSet
DSR740DPX
released
Annotation file set
: Gene expression annotation of embryonic stem cell Undifferentiated ES cell from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP