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Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
5
chromatin state
1
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ATAC-seq
Available data
5
bed bed3+
File set status
6
released
Genome assembly (visualization)
5
hg19
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Biosample term
10
neural progenitor cell
6
embryonic stem cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
4
adipocyte
2
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
bipolar neuron
1
cardiac muscle cell
1
cardiac precursors
1
dermis microvascular lymphatic vessel endothelial cell
1
erythroid cell
1
excitatory neuron
1
foreskin keratinocyte
1
foreskin melanocyte
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
iPS DF 4.7 Cell Line
1
lower motor neuron
1
mammary gland epithelial cell
1
mesenchymal stem cell
1
mesendoderm
1
natural killer cell
1
neuron cell of Hypothalamus (neuron)
1
neuronal stem cell
1
olfactory neurosphere cell line
1
renal cell carcinoma
1
skin fibroblast
Date released
5
May, 2021
1
November, 2022
Software used
6
macs
Lab
5
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
6
AMP
RFA
5
AMP
1
AMP2
biosample_term_name!
HuTu-80 cell
Showing 6 of 6 results
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FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR995THT
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Late pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR305VKL
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Early pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR323EMN
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Gut tube cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838FNO
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Embyonic stem cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661PJZ
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Definitive endoderm cells
Lab:
AMP-T2D consortium
Project:
AMP