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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
18
candidate regulatory elements
14
target gene predictions
9
accessible chromatin
7
chromatin state
6
eQTL
4
binding sites
4
histone modifications
2
gene expression
1
caQTL
1
differential activity
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
6
bigBed bed9
5
bed bed9
1
bam
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
16
hg19
GRCh38
Organism
7
Homo sapiens
Biosample type
5
in vitro differentiated cells
2
tissue
Biosample term
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
4
adipocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
inflammatory macrophage
3
islet of Langerhans
2
ESC derived cell line
2
erythroblast
2
liver
1
BL-2 cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
GM12878
1
H1-hESC
1
HepG2
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
keratinocyte
1
layer of hippocampus
1
mammary epithelial cell
1
mature eosinophil
1
mid-frontal lobe
1
mucosa of rectum
1
pancreas
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
Organ
2
liver
Date released
5
May, 2021
2
August, 2017
Software used
7
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
assembly!
GRCh38
Showing 7 of 7 results
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Download
FileSet
DSR103NWH
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Late pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR146BON
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Early pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR622ZAP
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Gut tube cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR148OGH
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Embyonic stem cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044ECG
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Definitive endoderm cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR027410
released
Annotation file set
: ChromHMM 13-state model for Liver
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR241972
released
Annotation file set
: ChromHMM 18-state model for Liver
Lab:
AMP-T2D consortium
Project:
AMP