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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
8
chromatin state
6
accessible chromatin
4
target gene predictions
3
binding sites
3
candidate regulatory elements
3
histone modifications
2
eQTL
1
gene expression
Annotation Category
4
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
Biosample term
54
HeLa-S3
38
H1-hESC
22
K562
20
heart
19
HFFc6
19
stomach
18
A549
17
lung
16
brain
16
muscle of arm
16
small intestine
15
adrenal gland
14
kidney
14
placenta
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
13
thymus
11
right lung
10
common myeloid progenitor, CD34-positive
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
liver
9
renal cortex interstitium
9
renal pelvis
7
B cell
7
GM12878
7
H9
7
adipose tissue
7
heart left ventricle
7
lymphocyte
7
psoas muscle
7
spinal cord
7
spleen
6
olfactory receptor cell
6
sigmoid colon
5
CD8-positive, alpha-beta memory T cell
5
MCF-7
5
heart right ventricle
5
mononuclear cell
5
neural progenitor cell
5
ovary
5
trophoblast cell
4
CyT49
4
HUES8
4
aorta
4
body of pancreas
4
chorionic villus
4
foreskin keratinocyte
4
gastrocnemius medialis
4
iPSC derived cell line
4
muscle of trunk
4
pancreas
4
thyroid gland
4
transverse colon
3
CD14-positive monocyte
3
CD4-positive, alpha-beta memory T cell
3
HCT116
3
Peyer's patch
3
T cell
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
endocrine pancreas
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
esophagus
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
mesenchymal stem cell
3
natural killer cell
3
neurosphere
3
retina
3
testis
3
tibial nerve
3
trophoblast
3
upper lobe of left lung
2
Ammon's horn
2
Brodmann (1909) area 46
2
CD4-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
HepG2
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T-helper 1 cell
2
T-helper 2 cell
2
T47D
2
angular gyrus
2
ascending aorta
2
breast epithelium
2
cerebellum
2
chorion membrane
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
dermis blood vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
frontal cortex
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
mammary gland epithelial cell
2
mesendoderm
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive T cell
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
regulatory T cell
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle tissue
2
skin fibroblast
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
EndoC_BH1
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM08714
1
GM10248
1
GM10266
1
GM12875
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
HAP-1
1
HEK293
1
HEK293T
1
HL-60
Life stage
3
adult
unknown
Date released
3
September, 2022
1
March, 2020
Software used
3
r
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
unknown
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR767AUW
released
Annotation file set
: Target gene predictions for BSS01689 T cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR694BWU
released
Annotation file set
: Target gene predictions for BSS01688 T cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR147ZOO
released
Annotation file set
: Target gene predictions for BSS01687 T cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP