Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Target gene links
Annotation type Category
ChIP-seq
6
DNase-seq
1
RNA-seq
1
pCHi-C
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
52
HeLa-S3
46
H1-hESC
34
islet of Langerhans
26
monocyte
22
endothelial cell
19
HFFc6
18
macrophage
17
K562
17
epithelial cell of proximal tubule
17
hepatocyte
17
induced pluripotent stem cell
16
subcutaneous adipose tissue
15
CD14-positive monocyte
15
glomerular endothelial cell
13
EndoC_BH1
13
liver
13
pancreatic ductal cell
12
fibroblast
12
regulatory T cell
12
smooth muscle cell
11
cardiomyocytes
11
pancreatic delta cell
10
CD8-positive, alpha-beta T cell
10
T-helper 1 cell
10
T-helper 17 cell
10
adipose tissue
10
coronary artery
10
pancreatic acinar cell
10
pancreatic alpha cell
10
pancreatic beta cell
10
pericyte cell
10
pituitary stalk
9
extended pluripotent stem (EPS) cells
9
kidney
9
progenitor cell of endocrine pancreas
9
right atrium auricular region
9
tibial nerve
8
body of pancreas
8
cardiomyocytes (cardiac muscle cell)
8
frontal cortex
8
naive thymus-derived CD8-positive, alpha-beta T cell
8
neural progenitor cell
8
putamen
8
tibial artery
7
B cell
7
GM12878
7
H9
7
adipocyte
7
caudate nucleus
7
cerebellum
7
dendritic cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
memory B cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
natural killer cell
7
omental fat pad
7
substantia nigra
6
Ammon's horn
6
T-helper 2 cell
6
amygdala
6
anterior cingulate cortex
6
ascending aorta
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
gamma-delta T cell
6
glomerular visceral epithelial cell
6
heart
6
heart left ventricle
6
hypothalamus
6
iPSC derived cell line
6
kidney interstitial cell
6
lymphoblastoid cell line
6
lymphocyte
6
nucleus accumbens
6
olfactory receptor cell
6
pancreatic stellate cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
adrenal gland
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
gastrocnemius medialis(Muscle - Skeletal)
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mesangial cell
5
mesenchymal stem cell
5
naive B cell
5
neutrophil
5
pancreas
5
right lobe of liver
4
CyT49
4
HUES8
4
adult endothelial progenitor cell
4
astrocyte
4
basal cell
4
bone tissue
4
brain
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endothelial cell of hepatic sinusoid
4
endothelial cell of umbilical vein
4
heart right ventricle
4
keratinocyte
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
myofibroblast cell
4
nephron progenitor
4
ovary
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic polypeptide-secreting cell
4
psoas muscle
4
skeletal muscle fiber
4
skeletal muscle myoblast
4
smooth muscle cell of the coronary artery
4
spleen
4
stomach
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
4
vascular associated smooth muscle cell
4
visceral abdominal adipose tissue
3
CD4-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
activated CD4-positive, alpha-beta T cell
3
aorta
3
blood cell
3
cardiac muscle cell
3
colon epithelial cell
Date released
1
March, 2020
1
May, 2021
Software used
macs
1
nospecificsoft_customcode
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
ChIP-seq
software_used.software.name!
macs
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR740DPX
released
Annotation file set
: Gene expression annotation of embryonic stem cell Undifferentiated ES cell from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP