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Schema
Citing CMDGA
Clear Filters
Annotation type
3
chromatin state
1
candidate regulatory elements
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
2
bed bed9+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
6
NAMALWA cell
6
SK-N-DZ
6
SK-N-SH
4
glomerular visceral epithelial cell
4
heart
4
psoas muscle
3
A673
3
BE(2)-C
3
CD14-positive, CD16-negative classical monocyte
3
CMK
3
DND-41
3
Daoy
3
G401
3
GM03348
3
GM08714
3
HepG2
3
MG63
3
SJCRH30
3
SK-N-MC
3
WERI-Rb-1
3
heart left ventricle
3
heart right ventricle
3
lung
3
lymphocyte
3
medulloblastoma
3
sigmoid colon
3
small intestine
3
spleen
3
stomach
3
thymus
3
urothelium cell line
2
alternatively activated macrophage
2
erythroblast
2
mature neutrophil
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
cardiac atrium fibroblast
1
pancreatic ductal cell
Organ
3
thymus
Life stage
38
embryonic
5
child
1
young adult
Date released
3
September, 2022
2
May, 2022
Software used
3
chromhmm
2
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR008RJQ
released
Annotation file set
: Candidate regulatory elements for BSS01825 thymus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR364FEE
released
Annotation file set
: Target gene predictions for BSS01825 thymus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649ZPZ
released
Annotation file set
: Chromatin states for BSS01825 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855DIH
released
Annotation file set
: Chromatin state of erythroblast from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR640XWO
released
Annotation file set
: Chromatin state of erythroblast from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP