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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
primary cell
Biosample term
41
heart
39
stomach
36
A549
35
kidney
33
brain
33
lung
32
muscle of arm
30
small intestine
29
adrenal gland
28
placenta
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
22
right lung
22
thymus
21
hematopoietic multipotent progenitor cell
20
right kidney
18
left kidney
18
renal cortex interstitium
18
renal pelvis
16
liver
15
adipose tissue
15
neural progenitor cell
14
spinal cord
13
islet of Langerhans
13
spleen
12
K562
11
cardiomyocytes
11
heart left ventricle
10
H1-hESC
10
MCF-7
10
body of pancreas
10
sigmoid colon
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
ovary
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
8
chorionic villus
8
endocrine pancreas
8
gastrocnemius medialis
8
muscle of trunk
8
psoas muscle
8
thyroid gland
8
tibial nerve
8
transverse colon
7
caudate nucleus
7
heart right ventricle
7
retina
7
skeletal muscle tissue
7
testis
6
HeLa-S3
6
Peyer's patch
6
cerebellum
6
chorion membrane
6
endometrium adenocarcinoma
6
frontal cortex
6
immortal human breast epithelial cell line cell
6
layer of hippocampus
6
omental fat pad
6
right atrium auricular region
6
upper lobe of left lung
5
adipocyte
5
aorta
5
ascending aorta
5
coronary artery
5
subcutaneous adipose tissue
5
substantia nigra
5
temporal lobe
5
tibial artery
5
vagina
4
22Rv1
4
Brodmann (1909) area 46
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
T47D
4
angular gyrus
4
bone tissue
4
breast epithelium
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
esophagus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
eye
4
left renal cortex interstitium
4
left renal pelvis
4
limb
4
lower leg skin
4
mesenchymal stem cell
4
mucosa of rectum
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
pancreas
4
parathyroid adenoma
4
prostate gland
4
right renal cortex interstitium
4
right renal pelvis
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
urinary bladder
3
Ammon's horn
3
hepatocyte(AFP)
3
left cardiac atrium
3
occipital lobe
3
pancreatic ductal cell
3
putamen
3
right cardiac atrium
3
right lobe of liver
3
smooth muscle cell
3
uterus
2
8988T
2
A172
2
A673
2
ACC112
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08395 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
AG20443
2
BE(2)-C
2
BJ cell
2
C4-2B
2
CMK
2
COLO829
2
CWRU1
2
Caco-2 cell
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
ES-I3
2
G401
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
GM23338
2
H4
2
H54
2
H7-hESC
2
H9
2
HAP-1
2
HCT116
2
HEK293
2
HEK293T
2
HK-2 cell
2
HL-60
2
HPDE6-E6E7
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HTR-8/Svneo
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
HuH-7
2
HuH-7.5
2
IMR-90
2
KARPAS-422 cell
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
L1-S8R
2
LHCN-M2
Disease term
2
colorectal adenocarcinoma
Life stage
2
adult
Date released
2
September, 2022
Software used
14
macs
7
chromhmm
2
r
1
nospecificsoft_customcode
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR200CHJ
released
Annotation file set
: Candidate regulatory elements for BSS00159 Caco-2 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR640ZGC
released
Annotation file set
: Target gene predictions for BSS00159 Caco-2 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP