Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
gene expression
2
accessible chromatin
2
binding sites
2
variant allelic effects
1
caQTL
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
20
pigmented layer of retina
8
EndoC_BH1
8
retinal pigment epithelial cell
5
pancreatic ductal cell
4
pancreatic beta cell
3
pancreatic acinar cell
3
pancreatic alpha cell
2
aortic endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell
2
endothelial cell of umbilical vein
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatocyte
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
pancreatic delta cell
2
renal cortical epithelial cell
1
brain microvascular endothelial cell
1
breast epithelium
1
bronchial epithelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
esophagus squamous epithelium
1
foreskin keratinocyte
1
glomerular epithelium
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
mammary epithelial cell
1
mammary gland epithelial cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pancreatic polypeptide-secreting cell
1
pulmonary artery endothelial cell
1
renal cortex tubule
1
tracheal epithelial cell
1
type B pancreatic cell
1
urothelial cell
Organ
2
epithelium
Life stage
1
unknown
Date released
1
February, 2024
1
May, 2022
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
10
ENCODE3
3
AMP2
2
AMP
1
T1D
biosample_term_name!
B-Lymphocytes
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR897TMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of endothelial cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP