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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
5
hepatocyte
4
endothelial cell
4
endothelial cell of hepatic sinusoid
3
pancreatic ductal cell
3
smooth muscle cell
2
adipocyte
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
2
fibroblast
2
leukocyte
2
mesenchymal stem cell
2
pancreatic acinar cell
pancreatic stellate cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
type I muscle cell
2
type II muscle cell
1
CD4-positive helper T cell
1
Schwann cell
1
T cell
1
glial cell
1
liver
1
macrophage
1
neural cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pigmented layer of retina
1
preadipocyte
1
tissue-resident macrophage
1
type B pancreatic cell
Organ
4
epithelium
Life stage
1
adult
1
unknown
Date released
10
November, 2021
2
February, 2024
2
May, 2022
1
August, 2021
1
January, 2021
Software used
4
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Project
4
AMP
RFA
2
AMP
2
AMP2
biosample_term_name!
pancreatic stellate cell
Showing 4 of 4 results
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Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR897TMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of endothelial cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR426RPD
released
Annotation file set
: Accessible chromatin annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR264NGG
released
Annotation file set
: Cell type chromatin broad peaks and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP