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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
5
hepatocyte
4
endothelial cell of hepatic sinusoid
3
pancreatic ductal cell
2
adipocyte
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
2
endothelial cell
2
pancreatic acinar cell
2
pancreatic stellate cell
2
skeletal muscle fiber
1
CD4-positive helper T cell
1
Schwann cell
1
glial cell
1
leukocyte
1
mesenchymal stem cell
1
neural cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pigmented layer of retina
1
preadipocyte
1
skeletal muscle satellite cell
1
smooth muscle cell
1
tissue-resident macrophage
1
type B pancreatic cell
1
type I muscle cell
1
type II muscle cell
Disease term
1
age-related macular degeneration
Organ
3
epithelium
1
eye
Life stage
1
adult
Date released
10
February, 2023
10
November, 2021
9
November, 2022
3
February, 2024
2
May, 2022
1
August, 2021
1
January, 2021
Software used
3
macs
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
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Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR869SUP
released
Annotation file set
: Accessible chromation annotation of ATAC-seq of RPE from Macula of AMD
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR264NGG
released
Annotation file set
: Cell type chromatin broad peaks and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP