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Citing CMDGA
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Annotation type
16
accessible chromatin
10
gene expression
7
target gene predictions
2
binding sites
2
caQTL
2
variant allelic effects
1
eQTL
1
histone modifications
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
4
hepatocyte
3
endothelial cell
3
keratinocyte
2
pancreatic ductal cell
2
tracheal epithelial cell
1
aortic endothelial cell
1
bronchial epithelial cell
1
choroid plexus epithelial cell
1
corneal epithelium
1
dermis lymphatic vessel endothelial cell
1
epithelial cell of prostate
1
foreskin keratinocyte
1
intestinal epithelial cell
1
intestinal epithelium
1
kidney epithelium
1
mammary gland epithelial cell
1
meso-epithelial cell
1
pancreatic acinar cell
1
pulmonary artery endothelial cell
1
retinal pigment epithelial cell
1
vein endothelial cell
Organ
3
epithelium
Date released
1
February, 2021
1
February, 2023
1
October, 2022
Software used
2
rasqual
1
eigenmt
1
macs
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR296FOQ
released
Annotation file set
: Histone modifications annotation for Cardiovascular Endothelial_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP