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Schema
Citing CMDGA
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Annotation type
13
candidate regulatory elements
10
target gene predictions
9
chromatin state
7
eQTL
7
gene expression
6
accessible chromatin
3
binding sites
3
histone modifications
2
caQTL
2
variant allelic effects
1
differential activity
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
smooth muscle cell of the coronary artery
Organ
1
epithelium
1
liver
Date released
1
February, 2023
1
May, 2022
Software used
2
rasqual
1
eigenmt
Lab
1
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
2
AMP
RFA
2
AMP
1
AMP2
Showing 2 of 2 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP