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Citing CMDGA
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Annotation type
32
accessible chromatin
13
gene expression
12
target gene predictions
9
eQTL
5
variant allelic effects
4
caQTL
3
binding sites
2
histone modifications
Annotation Category
4
Genetic variant effects
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
CD4-positive helper T cell
2
endothelial cell
1
coronary artery
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
mesenchymal stem cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
2
epithelium
1
musculature of body
Date released
2
February, 2023
2
October, 2022
Software used
4
rasqual
2
eigenmt
Lab
2
AMP-T2D consortium
2
Stephen Parker, UMich
Project
4
AMP
RFA
2
AMP
2
AMP2
Showing 4 of 4 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP