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Schema
Citing CMDGA
Clear Filters
Annotation type
7
gene expression
5
accessible chromatin
2
binding sites
2
caQTL
2
variant allelic effects
1
eQTL
1
histone modifications
0
target gene predictions
Annotation Category
7
Gene expression levels
Annotation type Category
3
RNA-seq
3
scRNA-seq
1
snRNA-seq
Available data
9
tsv
txt
File set status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
in vitro differentiated cells
Biosample term
55
HeLa-S3
47
H1-hESC
23
K562
23
heart
22
stomach
21
kidney
19
A549
19
CD14-positive monocyte
19
HFFc6
18
adrenal gland
18
lung
17
brain
17
monocyte
17
small intestine
16
hepatocyte
16
muscle of arm
15
placenta
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
B cell
12
islet of Langerhans
12
neural progenitor cell
11
adipose tissue
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
liver
11
right lung
10
T-helper 1 cell
10
induced pluripotent stem cell
10
pituitary stalk
10
regulatory T cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
T-helper 17 cell
9
extended pluripotent stem (EPS) cells
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
9
spleen
8
GM12878
8
H9
8
adipocyte
8
heart left ventricle
8
psoas muscle
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
body of pancreas
7
cardiomyocytes (cardiac muscle cell)
7
endothelial cell
7
lymphocyte
7
ovary
7
pancreatic ductal cell
7
sigmoid colon
7
trophoblast cell
6
MCF-7
6
T-helper 2 cell
6
dendritic cell
6
heart right ventricle
6
mononuclear cell
6
olfactory receptor cell
5
CD8-positive, alpha-beta T cell
5
aorta
5
cardiac precursors (cardiac muscle cell)
5
gastrocnemius medialis
5
mesenchymal stem cell
5
muscle of trunk
5
natural killer cell
5
pancreas
5
subcutaneous adipose tissue
5
thyroid gland
5
tibial nerve
5
transverse colon
4
CyT49
4
HUES8
4
T cell
4
bone tissue
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
coronary artery
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
endothelial cell of umbilical vein
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
frontal cortex
4
gamma-delta T cell
4
iPSC derived cell line
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
omental fat pad
4
osteoblast
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
4
retina
4
right atrium auricular region
4
skeletal muscle myoblast
4
skeletal muscle tissue
4
testis
3
Ammon's horn
3
HCT116
3
HepG2
3
Peyer's patch
3
S-shaped body
3
SK-N-SH
3
ascending aorta
3
astrocyte
3
breast epithelium
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
esophagus
3
fibroblast of cardiac tissue
3
foreskin fibroblast
3
glomerular visceral epithelial cell
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney interstitial cell
3
kidney tubule cell
3
layer of hippocampus
3
macrophage
3
mammary gland epithelial cell
3
memory B cell
3
mesendoderm
3
naive T cell
3
neurosphere
3
neutrophil
3
right cardiac atrium
3
skeletal muscle satellite cell
3
smooth muscle cell
3
smooth muscle cell of the coronary artery
3
substantia nigra
3
temporal lobe
3
tibial artery
3
trophoblast
3
upper lobe of left lung
3
uterus
3
vagina
2
22Rv1
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
CD4-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
Kupffer cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T follicular helper cell
2
T-cell
2
T47D
2
THP-1
2
U937
2
angular gyrus
2
bipolar neuron
2
bronchial epithelial cell
2
cardiac muscle cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
embryonic stem cell
2
endodermal cell
2
epithelial cell of proximal tubule
2
erythroblast
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
Organ
7
epithelium
Life stage
4
adult
1
fetal
Date released
4
February, 2021
2
May, 2021
1
February, 2024
Software used
7
r
1
deeptools
1
samtools
1
umitools
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
6
ENCODE
1
T1D
RFA
6
AMP
1
AMP2
files.file_type!
txt
Showing 7 of 7 results
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Download
FileSet
DSR771OBM
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669UJX
released
Annotation file set
: Gene expression annotation of endothelial cell_EC ISL1-PECAM1+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR946TAA
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of End from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661VCO
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Portal Endothelial Cells from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365BTF
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Central Venous LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR308YEA
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Peripotal LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP