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Schema
Citing CMDGA
Clear Filters
Annotation type
5
gene expression
2
accessible chromatin
2
variant allelic effects
1
eQTL
Annotation Category
5
Gene expression levels
Annotation type Category
4
RNA-seq
1
snRNA-seq
Available data
4
tsv
File set status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
5
T-helper 1 cell
5
hepatocyte
5
regulatory T cell
4
T-helper 17 cell
4
endothelial cell of hepatic sinusoid
3
hepatocyte(AFP)
3
pancreatic ductal cell
2
skeletal muscle fiber
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
T-helper 2 cell
1
adipocyte
1
astrocyte
1
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
endothelial cell
1
excitatory neuron
1
glial cell
1
hippocampal neuron
1
leukocyte
1
lower motor neuron
1
memory B cell
1
mesenchymal stem cell
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neural cell
1
skeletal muscle satellite cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
1
epithelium
Life stage
3
adult
Date released
5
February, 2024
4
August, 2021
4
February, 2021
4
May, 2021
3
September, 2023
Software used
5
r
1
deeptools
1
samtools
1
umitools
Lab
4
AMP-T2D consortium
1
Stephen Parker, UMich
Project
5
AMP
RFA
4
AMP
1
AMP2
Showing 5 of 5 results
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Download
FileSet
DSR746ZXQ
released
Annotation file set
: Gene expression annotation for RNA-seq of PRJEB11844 for T-helper 17 cell from NSCLC Squamous Cell Carcinoma
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR221JRJ
released
Annotation file set
: Gene expression annotation for RNA-seq of PRJEB11844 for T-helper 17 cell from CRC Adenocarcinoma
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR266DKI
released
Annotation file set
: Gene expression annotation for RNA-seq of PRJEB11844 for T-helper 17 cell from CRC Healthy Tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR151QDV
released
Annotation file set
: Gene expression annotation for BLUEPRINT study of ncRNA-seq of EBI:E-MTAB-2319 for CD4 Th17(CD4+ CCR6+ CD161+ CXCR3-)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP