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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
accessible chromatin
2
variant allelic effects
1
eQTL
Annotation Category
3
Gene expression levels
Annotation type Category
1
RNA-seq
1
scRNA-seq
1
snRNA-seq
Available data
2
tsv
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
15
monocyte
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
7
T-helper 1 cell
7
regulatory T cell
6
T-helper 17 cell
5
hepatocyte
4
endothelial cell of hepatic sinusoid
4
pancreatic ductal cell
3
T-helper 2 cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
endothelial cell
3
hepatocyte(AFP)
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
skeletal muscle fiber
2
smooth muscle cell
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Schwann cell
1
activated pancreatic stellate cell
1
adipocyte
1
astrocyte
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiomyocytes (cardiac muscle cell)
1
central memory CD4-positive, alpha-beta T cell
1
cytotoxic T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
excitatory neuron
1
glial cell
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
leukocyte
1
lower motor neuron
1
macrophage
1
mast cell
1
mesenchymal stem cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neural cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
quiescent pancreatic stellate cell
1
skeletal muscle satellite cell
1
stem cell
1
type I muscle cell
1
type II muscle cell
Organ
3
epithelium
Life stage
1
adult
Date released
4
February, 2021
3
August, 2021
2
May, 2021
1
February, 2024
Software used
3
r
1
deeptools
1
samtools
1
umitools
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
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Download
FileSet
DSR771OBM
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669UJX
released
Annotation file set
: Gene expression annotation of endothelial cell_EC ISL1-PECAM1+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP