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Schema
Citing CMDGA
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Annotation type
binding sites
1
histone modifications
Annotation Category
1
cis-regulatory elements
Annotation type Category
19
snATAC-seq
7
ATAC-seq
6
scRNA-seq
4
RNA-seq
1
ChIP-seq
1
snRNA-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
88
monocyte
79
stomach
78
heart
66
brain
65
lung
65
muscle of arm
61
kidney
59
small intestine
58
A549
56
adrenal gland
56
placenta
55
muscle of leg
54
large intestine
54
muscle of back
53
common myeloid progenitor, CD34-positive
52
left lung
44
right lung
43
thymus
40
hematopoietic multipotent progenitor cell
40
right kidney
38
CD8-positive, alpha-beta T cell
38
renal cortex interstitium
37
renal pelvis
36
left kidney
32
B cell
32
CD4-positive, alpha-beta memory T cell
31
liver
29
neural progenitor cell
29
spinal cord
27
spleen
25
heart left ventricle
22
CD8-positive, alpha-beta memory T cell
21
K562
21
MCF-7
20
foreskin keratinocyte
20
sigmoid colon
19
adipose tissue
19
mononuclear cell
19
trophoblast cell
16
CD14-positive monocyte
16
body of pancreas
16
chorionic villus
16
muscle of trunk
15
endocrine pancreas
15
gastrocnemius medialis
15
ovary
15
psoas muscle
15
thyroid gland
15
transverse colon
14
layer of hippocampus
13
Peyer's patch
13
T cell
13
adipocyte
13
caudate nucleus
13
endothelial cell of umbilical vein
13
fibroblast of lung
13
neurosphere
13
skeletal muscle tissue
13
testis
13
tibial nerve
13
upper lobe of left lung
12
T-helper 1 cell
12
foreskin fibroblast
12
heart right ventricle
12
natural killer cell
12
retina
11
CD4-positive, alpha-beta T cell
11
HeLa-S3
11
T-helper 17 cell
11
T-helper 2 cell
11
breast cancer cell
11
fibroblast of cardiac tissue
11
hepatocyte
11
regulatory T cell
11
temporal lobe
10
HepG2
10
angular gyrus
10
aorta
10
bronchial epithelial cell
10
cardiac muscle cell
10
esophagus squamous epithelium
10
fibroblast of dermis
10
mammary gland epithelial cell
10
substantia nigra
9
22Rv1
9
H9
9
SK-N-DZ
9
ascending aorta
9
breast epithelium
9
colonic mucosa
9
dermis blood vessel endothelial cell
9
duodenal mucosa
9
endodermal cell
9
epithelial cell of prostate
9
keratinocyte
9
left renal cortex interstitium
9
neutrophil
9
parathyroid adenoma
9
right renal cortex interstitium
8
Rhabdomyosarcoma
8
SK-N-SH
8
cerebellum
8
chorion membrane
8
cingulate gyrus
8
coronary artery
8
endometrium adenocarcinoma
8
eye
8
gastric cancer cell
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
mesenchymal stem cell
8
myoepithelial cell of mammary gland
8
naive T cell
8
omental fat pad
8
pancreas
8
right renal pelvis
8
thoracic aorta
8
tongue
7
LNCaP clone FGC
7
NAMALWA cell
7
T47D
7
WI38
7
dermis lymphatic vessel endothelial cell
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
left cardiac atrium
7
left renal pelvis
7
limb
7
neuroblastoma cell
7
prostate gland
7
skeletal muscle myoblast
7
stomach smooth muscle
7
tibial artery
7
trophoblast
6
B-lymphoblastoid cell line
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
GM12878
6
HEK293
6
embryonic stem cell
6
esophagus
6
fibroblast of breast
6
foreskin melanocyte
6
kidney tubule cell
6
mammary epithelial cell
6
mature neutrophil
6
mucosa of rectum
6
osteoblast
6
vagina
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
5
CMK
5
GM06990
5
GM12864
5
GM12865
5
GM12875
5
GM23248
5
H1-hESC
5
HAP-1
5
HL-60
5
HT-29
5
IMR-90
5
KARPAS-422 cell
5
LHCN-M2
5
MG63
5
MM.1S
5
OCI-LY1
5
OCI-LY7
5
PC-3
5
PC-9
5
RPMI8226
5
RWPE1
5
SK-MEL-5
5
SK-N-MC
5
SW480
5
T-cell acute lymphoblastic leukemia
5
WERI-Rb-1
5
astrocyte
5
choroid plexus epithelial cell
5
fibroblast of pulmonary artery
5
muscle layer of colon
5
muscle layer of duodenum
5
umbilical cord
5
urinary bladder
4
A172
4
A673
4
ACC112
4
ACHN
4
AG04449 cell
4
AG04450 cell
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
Ammon's horn
4
BE(2)-C
4
BJ cell
4
C4-2B
4
Caco-2 cell
4
Caki2
Organ
1
epithelium
Date released
1
February, 2021
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
AG09309 cell
annotation_type!
binding sites
Showing 1 of 1 results
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Download
FileSet
DSR296FOQ
released
Annotation file set
: Histone modifications annotation for Cardiovascular Endothelial_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP