Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
caQTL
Annotation Category
12
cis-regulatory elements
6
Target gene links
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
8
macrophage
6
coronary artery
6
lymphoblastoid cell line
6
putamen
6
substantia nigra
5
amygdala
5
anterior cingulate cortex
5
caudate nucleus
5
cerebellum
5
frontal cortex
5
hypothalamus
5
nucleus accumbens
5
right atrium auricular region
5
subcutaneous adipose tissue
5
tibial artery
5
tibial nerve
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
ascending aorta
4
body of pancreas
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
omental fat pad
4
right lobe of liver
3
blood cell
3
islet of Langerhans
3
monocyte
3
skin of body
2
CD4-positive helper T cell
2
T cell
2
brain
2
fibroblast
2
iPSC derived cell line
2
muscle
2
regulatory T cell
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
breast
1
cerebellar hemisphere
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
endothelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
fibroblast of the aortic adventitia
1
heart left ventricle
1
helper T cell
1
layer of hippocampus
1
liver
1
lung
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
prostate gland
1
retina
1
sensory neuron
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
stomach
1
testis
1
thyroid gland
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
1
epithelium
Date released
1
February, 2023
Software used
1
rasqual
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP