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Schema
Citing CMDGA
Clear Filters
Annotation type
2
variant allelic effects
1
accessible chromatin
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
8
fibroblast
4
macrophage
3
T cell
3
endothelial cell
3
enterocyte
3
myofibroblast cell
3
smooth muscle cell
2
Schwann cell
2
basal cell
2
epithelial cell of esophagus
2
goblet cell
2
skeletal muscle fiber
2
vascular associated smooth muscle cell
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
bronchial goblet cell
1
cardiac muscle cell
1
cell
1
cortical cell of adrenal gland
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
parietal cell
1
peptic cell
1
thyroid follicular cell
1
type II pneumocyte
Organ
3
epithelium
Life stage
1
adult
Date released
2
February, 2024
1
May, 2022
Software used
2
deltasvm
1
macs
Lab
11
AMP-T2D consortium
4
Katalin Susztak, Upenn
4
Stephen Parker, UMich
3
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
16
ENCODE
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
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Download
FileSet
DSR426RPD
released
Annotation file set
: Accessible chromatin annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR035TOY
released
Annotation file set
: Variant allelic effects annotation of Endothelial cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR772CSM
released
Annotation file set
: Variant allelic effects annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP