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Annotation type
1
gene expression
Annotation Category
1
Gene expression levels
Annotation type Category
1
snRNA-seq
Available data
bed bed3+
14
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
21
heart
19
stomach
18
A549
18
brain
16
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
liver
13
muscle of back
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
adipose tissue
8
body of pancreas
8
heart left ventricle
8
islet of Langerhans
8
tibial nerve
7
CD8-positive, alpha-beta memory T cell
7
ascending aorta
7
caudate nucleus
7
coronary artery
7
mature neutrophil
7
spinal cord
7
tibial artery
6
K562
6
cerebellum
6
frontal cortex
6
mononuclear cell
6
omental fat pad
6
right atrium auricular region
6
spleen
6
subcutaneous adipose tissue
6
substantia nigra
5
Ammon's horn
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
embryonic stem cell
5
heart right ventricle
5
neutrophil
5
putamen
5
right lobe of liver
5
sigmoid colon
5
skeletal muscle tissue
5
trophoblast cell
4
C1 segment of cervical spinal cord
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
amygdala
4
angular gyrus
4
anterior cingulate cortex
4
aorta
4
cerebellum (Hemisphere)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
hypothalamus
4
left ventricle myocardium
4
mesenchymal stem cell
4
muscle of trunk
4
neural progenitor cell
4
nucleus accumbens
4
ovary
4
psoas muscle
4
temporal lobe
4
thyroid gland
4
transverse colon
3
CD4-positive, alpha-beta T cell
3
HeLa-S3
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
adipocyte
3
cartilage tissue
3
chorion membrane
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
layer of hippocampus
3
mammary gland epithelial cell
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
neurosphere
3
regulatory T cell
3
retina
3
right cardiac atrium
3
skeletal muscle satellite cell
3
testis
3
thoracic aorta
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
blood
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
germinal matrix
2
hepatocyte
2
keratinocyte
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
monocyte
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neural cell
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skin fibroblast
2
smooth muscle cell
2
stomach smooth muscle
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
BJ cell
1
BL-2 cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DG-75 cell
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
Organ
1
epithelium
Date released
1
February, 2024
Software used
1
deeptools
1
r
1
samtools
1
umitools
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP2
biosample_term_name!
BJ cell
files.file_type!
bed bed3+
Showing 1 of 1 results
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Download
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP