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Schema
Citing CMDGA
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Annotation type
7
gene expression
Annotation Category
7
Gene expression levels
Annotation type Category
6
scRNA-seq
1
RNA-seq
Available data
7
tsv
3
txt
File set status
7
released
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
57
A549
40
common myeloid progenitor, CD34-positive
35
hematopoietic multipotent progenitor cell
25
adrenal gland
24
adipose tissue
24
liver
23
B cell
22
body of pancreas
22
stomach
20
spleen
20
tibial nerve
19
K562
19
MCF-7
17
caudate nucleus
16
epithelial cell of proximal tubule
16
gastrocnemius medialis
16
monocyte
16
omental fat pad
16
sigmoid colon
16
subcutaneous adipose tissue
16
thyroid gland
16
transverse colon
15
CD8-positive, alpha-beta memory T cell
15
mononuclear cell
14
ascending aorta
14
islet of Langerhans
14
natural killer cell
14
substantia nigra
13
Peyer's patch
13
coronary artery
13
glomerular endothelial cell
13
heart left ventricle
13
hepatocyte
13
ovary
13
right atrium auricular region
13
tibial artery
13
upper lobe of left lung
12
CD14-positive monocyte
12
T-helper 1 cell
12
cerebellum
12
endocrine pancreas
12
layer of hippocampus
12
psoas muscle
12
regulatory T cell
11
HeLa-S3
11
aorta
11
frontal cortex
11
pancreas
11
temporal lobe
10
angular gyrus
10
esophagus squamous epithelium
10
lower leg skin
10
putamen
9
Ammon's horn
9
CD4-positive, alpha-beta memory T cell
9
T cell
9
breast epithelium
9
endometrium adenocarcinoma
9
esophagus muscularis mucosa
9
immortal human breast epithelial cell line cell
9
kidney
9
parathyroid adenoma
9
right lobe of liver
9
skeletal muscle tissue
9
testis
9
thoracic aorta
9
vagina
8
CD4-positive, alpha-beta T cell
8
cingulate gyrus
8
colonic mucosa
8
duodenal mucosa
8
esophagus
8
fibroblast of breast
8
kidney tubule cell
8
mucosa of rectum
8
muscle layer of colon
8
muscle layer of duodenum
8
myoepithelial cell of mammary gland
8
prostate gland
8
small intestine
8
stomach smooth muscle
7
CD8-positive, alpha-beta T cell
7
LNCaP clone FGC
7
T-helper 2 cell
7
T47D
7
endothelial cell
7
gastroesophageal sphincter
7
kidney loop of Henle thin ascending limb epithelial cell
6
Brodmann (1909) area 46
6
kidney glomerular epithelial cell
6
lung
6
mammary gland epithelial cell
6
muscle cell
6
naive T cell
6
right cardiac atrium
6
skeletal muscle satellite cell
6
uterus
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
GM12878
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
adipocyte
5
amygdala
5
anterior cingulate cortex
5
cerebellum (Hemisphere)
5
dermis blood vessel endothelial cell
5
fibroblast of lung
5
gastrocnemius medialis(Muscle - Skeletal)
5
globus pallidus
5
heart right ventricle
5
hepatic stellate cell
5
hypothalamus
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mature neutrophil
5
medulla oblongata
5
mesenchymal stem cell
5
midbrain
5
middle frontal gyrus
5
nucleus accumbens
5
skeletal muscle myoblast
5
subcutaneous abdominal adipose tissue
4
A172
4
ACC112
4
ACHN
4
C4-2B
4
Caki2
4
DOHH2
4
GM04503
4
GM04504
4
GM23248
4
GM23338
4
H4
4
H54
4
HAP-1
4
HCT116
4
HL-60
4
HS-27A
4
HS-5
4
HT-29
4
HT1080
4
KBM-7
4
KMS-11
4
LHCN-M2
4
Loucy
4
M059J
Organ
7
epithelium
Life stage
7
adult
1
fetal
Date released
3
August, 2021
3
February, 2021
1
May, 2021
Software used
7
r
3
seurat
macs
Lab
4
AMP-T2D consortium
3
Katalin Susztak, Upenn
Project
7
AMP
RFA
4
AMP
3
AMP2
biosample_term_name!
SK-N-DZ
software_used.software.name!
macs
Showing 7 of 7 results
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Download
FileSet
DSR771OBM
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR239ZHY
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 3
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR555DIA
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 2
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR901DMS
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 1
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR661VCO
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Portal Endothelial Cells from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365BTF
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Central Venous LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR308YEA
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Peripotal LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP