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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
Annotation Category
3
Gene expression levels
Annotation type Category
2
RNA-seq
1
snRNA-seq
Available data
2
tsv
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
38
heart
33
brain
32
muscle of arm
31
kidney
30
lung
28
placenta
28
stomach
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
26
small intestine
22
right lung
22
thymus
20
right kidney
left kidney
18
renal cortex interstitium
18
renal pelvis
16
adrenal gland
15
neural progenitor cell
14
spinal cord
12
CD4-positive, alpha-beta memory T cell
11
cardiomyocytes
10
H1-hESC
10
trophoblast cell
9
T-helper 17 cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
8
chorionic villus
8
foreskin keratinocyte
8
islet of Langerhans
8
muscle of trunk
8
pancreatic ductal cell
6
B cell
6
chorion membrane
6
common myeloid progenitor, CD34-positive
6
heart left ventricle
6
liver
6
neurosphere
6
retina
5
T-helper 1 cell
5
T-helper 2 cell
5
heart right ventricle
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic beta cell
5
pancreatic delta cell
5
pancreatic stellate cell
4
22Rv1
4
CD8-positive, alpha-beta memory T cell
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
bronchial epithelial cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
dermis lymphatic vessel endothelial cell
4
endodermal cell
4
endothelial cell of umbilical vein
4
epithelial cell of prostate
4
eye
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
hepatocyte
4
keratinocyte
4
left renal cortex interstitium
4
left renal pelvis
4
limb
4
nephron progenitor
4
neutrophil
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
regulatory T cell
4
right renal cortex interstitium
4
right renal pelvis
4
skin fibroblast
4
smooth muscle cell
4
spleen
4
tongue
4
trophoblast
3
S-shaped body
3
adipocyte
3
astrocyte
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
endothelial cell
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hematopoietic multipotent progenitor cell
3
hepatocyte(AFP)
3
kidney epithelial cell
3
kidney interstitial cell
3
left cardiac atrium
3
memory B cell
3
mesenchymal stem cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neural cell
3
osteoblast
3
pancreatic quiescent stellate cell
3
skeletal muscle tissue
2
A673
2
AG04449 cell
2
AG04450 cell
2
BE(2)-C
2
BJ cell
2
CD14-positive monocyte
2
CD1c-positive myeloid dendritic cell
2
CD8-positive, alpha-beta T cell
2
CMK
2
CWRU1
2
DND-41
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
ES-I3
2
G401
2
GM03348
2
GM06990
2
GM08714
2
GM12864
2
GM12865
2
GM12891
2
GM12892
2
GM18507
2
H7-hESC
2
H9
2
HEK293
2
HEK293T
2
HK-2 cell
2
HTR-8/Svneo
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
IMR-90
2
KOPT-K1
2
L1-S8
2
L1-S8R
2
MG63
2
NCI-H460 cell
2
NT2-D1 cell
2
PC-9
2
Panc1
2
SJCRH30
2
SK-N-MC
2
T cell
2
T follicular helper cell
2
UCSF-4
2
WERI-Rb-1
2
WI38
2
amnion
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
arm bone
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac mesoderm primordium
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
colon carcinoma
2
colon epithelial cell
2
dermis blood vessel endothelial cell
2
ectodermal cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
embryonic facial prominence
2
endocrine pancreas
2
epidermal melanocyte
2
epithelial cell of amnion
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
femur
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
foreskin melanocyte
2
gamma-delta T cell
2
germinal center
2
germinal matrix
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 4.7 Cell Line
2
iPS DF 6.9
Organ
3
epithelium
Life stage
adult
1
fetal
Date released
1
February, 2021
1
February, 2024
1
May, 2021
Software used
17
macs
6
abc
3
r
2
deltasvm
2
rasqual
1
cicero
1
deeptools
1
eigenmt
1
qTLtools
1
samtools
1
umitools
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
biosample_term_name!
left kidney
relevant_life_stage!
adult
Showing 3 of 3 results
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Download
FileSet
DSR669UJX
released
Annotation file set
: Gene expression annotation of endothelial cell_EC ISL1-PECAM1+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR946TAA
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of End from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP