Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
eQTL
1
gene expression
Annotation Category
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
snATAC-seq
1
RNA-seq
1
snRNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
5
adipocyte
2
ESC derived cell line
2
endothelial cell
2
mesenchymal stem cell
2
skeletal muscle fiber
2
smooth muscle cell
2
type I muscle cell
2
type II muscle cell
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
glial cell
1
islet of Langerhans
1
keratinocyte
1
layer of hippocampus
1
leukocyte
1
liver
1
mammary epithelial cell
1
mid-frontal lobe
1
mucosa of rectum
1
neural cell
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
stomach smooth muscle
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
Organ
2
epithelium
Date released
2
February, 2024
Software used
1
deeptools
1
qTLtools
1
r
1
samtools
1
umitools
Lab
69
AMP-T2D consortium
6
Bing Ren, UCSD
4
Katalin Susztak, Upenn
2
Jesse Engreitz, Stanford University
2
Stephen Parker, UMich
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP2
annotation_type_category!
snATAC-seq
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP