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Annotation type
2
caQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
endothelial cell
1
liver
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
1
epithelium
1
liver
Date released
1
May, 2022
1
October, 2022
Software used
26
macs
26
r
9
chromhmm
7
abc
6
encode-ccres
3
rasqual
3
seurat
2
deltasvm
2
eigenmt
2
qTLtools
1
bimbam
1
cicero
1
deeptools
1
deseq2
1
emmax
1
haploview
1
hiccups
1
mach2qtl
1
nospecificsoft_customcode
1
samtools
1
snap
1
umitools
1
unknown
Lab
1
Karen Mohlke, UNC
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_term_name!
esophagus muscularis mucosa
Showing 2 of 2 results
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Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP