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Schema
Citing CMDGA
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Annotation type
4
gene expression
1
accessible chromatin
Annotation Category
4
Gene expression levels
1
cis-regulatory elements
Annotation type Category
4
scRNA-seq
1
ATAC-seq
Available data
4
tsv
3
txt
1
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
31
neural progenitor cell
8
H1-hESC
8
islet of Langerhans
8
kidney
6
liver
4
cartilage tissue
4
endothelial cell
3
hepatocyte
3
subcutaneous adipose tissue
2
adipose tissue
2
blood
2
kidney distal convoluted tubule epithelial cell
2
renal principal cell
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
HepG2
1
T-helper 17 cell
1
alternatively activated macrophage
1
aorta
1
aortic valve
1
cerebrospinal fluid
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart
1
heart right ventricle
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left cardiac atrium
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mitral valve
1
natural killer cell
1
omental fat pad
1
progenitor cell
1
proximal tubule cells with injury markers
1
pulmonary valve
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
1
right cardiac atrium
1
skeletal muscle tissue
1
synovial joint
1
tricuspid valve
Organ
4
epithelium
1
heart
Life stage
4
adult
1
embryonic
Date released
102
September, 2022
42
February, 2021
16
November, 2021
6
February, 2024
5
August, 2021
3
June, 2020
3
May, 2020
3
May, 2021
2
January, 2020
2
January, 2021
2
March, 2020
2
May, 2022
1
April, 2019
1
February, 2020
1
February, 2023
1
January, 2022
1
November, 2019
1
October, 2022
Software used
4
r
3
seurat
1
macs
Lab
4
Katalin Susztak, Upenn
1
AMP-T2D consortium
Project
5
AMP
RFA
4
AMP2
1
AMP
Showing 5 of 5 results
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Download
FileSet
DSR321UPS
released
Annotation file set
: Gene expression annotation of heart left ventricle from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR239ZHY
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 3
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR555DIA
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 2
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR901DMS
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 1
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR493PXL
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Endothelial cells
Lab:
Katalin Susztak, Upenn
Project:
AMP