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Schema
Citing CMDGA
Clear Filters
Annotation type
5
chromatin state
3
gene expression
Annotation Category
5
cis-regulatory elements
3
Gene expression levels
Annotation type Category
5
ChIP-seq
3
scRNA-seq
Available data
48
bed bed3+
14
bigWig
9
tsv
5
bed bed9
3
txt
File set status
8
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
8
Homo sapiens
Biosample type
7
primary cell
1
in vitro differentiated cells
Biosample term
21
heart
19
stomach
18
A549
18
brain
16
epithelial cell of proximal tubule
16
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
glomerular endothelial cell
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
heart left ventricle
7
CD8-positive, alpha-beta memory T cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
liver
7
spinal cord
6
K562
6
adipose tissue
6
mononuclear cell
6
spleen
5
MCF-7
5
embryonic stem cell
5
heart right ventricle
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
sigmoid colon
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
T-helper 17 cell
4
angular gyrus
4
aorta
4
body of pancreas
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
gastrocnemius medialis
4
glomerular visceral epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
muscle of trunk
4
natural killer cell
4
neural progenitor cell
4
ovary
4
psoas muscle
4
temporal lobe
4
thyroid gland
4
tibial nerve
4
transverse colon
3
HeLa-S3
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 2 cell
3
adult endothelial progenitor cell
3
ascending aorta
3
caudate nucleus
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
endothelial cell
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney interstitial cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
layer of hippocampus
3
mammary gland epithelial cell
3
mesangial cell
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
regulatory T cell
3
retina
3
right cardiac atrium
3
skeletal muscle tissue
3
testis
3
thoracic aorta
3
tibial artery
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipocyte
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
frontal cortex
2
germinal matrix
2
hepatocyte
2
keratinocyte
2
kidney inner medulla collecting duct intercalated cell
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skin fibroblast
2
stomach smooth muscle
2
substantia nigra
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
2
vascular associated smooth muscle cell
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
B-1 B cell
1
B-2 B cell
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
Organ
5
embryo
5
extraembryonic component
3
epithelium
Life stage
5
embryonic
3
adult
Date released
5
September, 2022
3
August, 2021
Software used
5
chromhmm
3
r
3
seurat
Lab
5
AMP-T2D consortium
3
Katalin Susztak, Upenn
Project
8
AMP
RFA
5
AMP
3
AMP2
month_released!
February, 2023
Showing 8 of 8 results
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Download
FileSet
DSR328FHX
released
Annotation file set
: Chromatin states for BSS01857 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR731TNX
released
Annotation file set
: Chromatin states for BSS01856 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR412BIH
released
Annotation file set
: Chromatin states for BSS01855 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014UYG
released
Annotation file set
: Chromatin states for BSS01853 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154AJI
released
Annotation file set
: Chromatin states for BSS01852 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR239ZHY
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 3
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR555DIA
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 2
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR901DMS
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 1
Lab:
Katalin Susztak, Upenn
Project:
AMP