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Schema
Citing CMDGA
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Annotation type
7
gene expression
Annotation Category
7
Gene expression levels
Annotation type Category
5
scRNA-seq
2
RNA-seq
Available data
31
bed bed3+
14
bigWig
7
tsv
3
txt
File set status
7
released
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
15
epithelial cell of proximal tubule
13
glomerular endothelial cell
11
cardiomyocytes
11
islet of Langerhans
10
subcutaneous adipose tissue
9
extended pluripotent stem (EPS) cells
9
hepatocyte
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
H1-hESC
7
endothelial cell
7
kidney
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
7
pancreatic ductal cell
6
body of pancreas
6
cerebellum
6
frontal cortex
6
kidney interstitial cell
6
omental fat pad
6
right atrium auricular region
6
tibial nerve
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Ammon's horn
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T-helper 1 cell
5
T-helper 17 cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
amygdala
5
anterior cingulate cortex
5
ascending aorta
5
caudate nucleus
5
cerebellum (Hemisphere)
5
coronary artery
5
gastrocnemius medialis(Muscle - Skeletal)
5
hypothalamus
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
nucleus accumbens
5
putamen
5
regulatory T cell
5
right lobe of liver
5
substantia nigra
5
tibial artery
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell of hepatic sinusoid
4
glomerular visceral epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mesangial cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic alpha+beta cell
4
pancreatic beta cell
4
pancreatic cycling alpha cell
4
pancreatic delta cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
adipose tissue
3
adult endothelial progenitor cell
3
cardiomyocytes (cardiac muscle cell)
3
heart
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
pancreatic quiescent stellate cell
3
visceral abdominal adipose tissue
2
Kupffer cell
2
gamma-delta T cell
2
kidney inner medulla collecting duct intercalated cell
2
liver
2
natural killer cell
2
osteoblast
2
renal vesicle
2
retina
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta T cell
1
EndoC_BH1
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
T-helper 2 cell
1
adipocyte
1
adrenal gland
1
alpha-beta T cell
1
alternatively activated macrophage
1
aorta
1
aorta wall
1
aortic valve
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
dendritic cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
heart left ventricle
1
heart right ventricle
1
hepatic stellate cell
1
hippocampal neuron
1
inflammatory macrophage
1
kidney - cortex
1
kidney - medulla
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
left cardiac atrium
Organ
7
epithelium
Life stage
6
adult
1
fetal
Date released
4
February, 2021
3
August, 2021
May, 2021
Software used
7
r
3
seurat
Lab
4
AMP-T2D consortium
3
Katalin Susztak, Upenn
Project
7
AMP
RFA
4
AMP
3
AMP2
month_released!
May, 2021
Showing 7 of 7 results
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Download
FileSet
DSR239ZHY
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 3
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR555DIA
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 2
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR901DMS
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 1
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR946TAA
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of End from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661VCO
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Portal Endothelial Cells from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365BTF
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Central Venous LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR308YEA
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Peripotal LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP