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Annotation type
1
caQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
smooth muscle cell of the coronary artery
Organ
1
epithelium
Date released
1
February, 2023
October, 2022
Software used
20
macs
15
r
6
abc
3
chromhmm
3
deltasvm
3
seurat
2
encode-ccres
1
cicero
1
deeptools
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
qTLtools
1
rasqual
1
samtools
1
umitools
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
October, 2022
Showing 1 of 1 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP