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Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
caQTL
1
eQTL
1
gene expression
Annotation Category
2
Genetic variant effects
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
RNA-seq
1
snRNA-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
15
kidney
4
endothelial cell
4
mesenchymal stem cell
4
skeletal muscle fiber
4
smooth muscle cell
4
type I muscle cell
4
type II muscle cell
2
adipocyte
2
glial cell
2
leukocyte
2
neural cell
2
skeletal muscle satellite cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
undifferentiated ESC (H9 cell line)
Organ
4
epithelium
Life stage
adult
Date released
3
February, 2024
1
October, 2022
Software used
1
deeptools
1
eigenmt
1
macs
1
qTLtools
1
r
1
rasqual
1
samtools
1
umitools
Lab
4
Stephen Parker, UMich
Project
4
AMP
RFA
16
ENCODE3
10
AMP
4
AMP2
2
T1D
relevant_life_stage!
adult
biosample_term_name!
heart
Showing 4 of 4 results
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FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR264NGG
released
Annotation file set
: Cell type chromatin broad peaks and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP