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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
Annotation Category
3
cis-regulatory elements
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
3
CD14-positive, CD16-negative classical monocyte
3
glomerular visceral epithelial cell
3
heart
2
A673
2
BE(2)-C
2
CMK
2
DND-41
2
Daoy
2
G401
2
GM03348
2
GM08714
2
HepG2
2
MG63
2
SJCRH30
2
SK-N-MC
2
WERI-Rb-1
2
alternatively activated macrophage
2
erythroblast
2
heart left ventricle
2
heart right ventricle
2
lung
2
lymphocyte
2
mature neutrophil
2
medulloblastoma
2
psoas muscle
2
sigmoid colon
2
small intestine
2
spleen
2
stomach
2
thymus
2
urothelium cell line
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
cardiac atrium fibroblast
1
pancreatic ductal cell
Organ
3
heart
Life stage
63
embryonic
4
adult
3
child
3
fetal
1
young adult
Date released
2
September, 2022
1
January, 2020
Software used
1
chromhmm
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_category!
Target gene links
Showing 3 of 3 results
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Download
FileSet
DSR238BKL
released
Annotation file set
: Candidate regulatory elements for BSS00516 heart from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR184ZIQ
released
Annotation file set
: Chromatin states for BSS00516 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR270JSX
released
Annotation file set
: Accessible chromatin annotation of heart child from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP