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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
binding sites
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
DNase-seq
3
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
tissue
4
cell line
Biosample term
27
common myeloid progenitor, CD34-positive
22
A549
22
B cell
20
hematopoietic multipotent progenitor cell
18
monocyte
16
fibroblast
15
endothelial cell
15
neural progenitor cell
14
CD4-positive, alpha-beta memory T cell
13
excitatory neuron
13
macrophage
12
CD8-positive, alpha-beta T cell
12
foreskin keratinocyte
11
T cell
11
hepatocyte
11
pericyte cell
11
retinal pigment epithelial cell
11
smooth muscle cell
10
MCF-7
10
adipocyte
10
astrocyte
10
natural killer cell
10
regulatory T cell
10
trophoblast cell
9
CD4-positive, alpha-beta T cell
9
T-helper 1 cell
8
CD14-positive monocyte
8
CD8-positive, alpha-beta memory T cell
8
EndoC_BH1
8
K562
8
cardiac muscle cell
8
endothelial cell of umbilical vein
8
foreskin fibroblast
8
pancreatic beta cell
7
H9
7
T-helper 17 cell
7
T-helper 2 cell
7
fibroblast of cardiac tissue
7
mesenchymal stem cell
7
mononuclear cell
7
neurosphere
7
osteoblast
7
pancreatic alpha cell
7
skeletal muscle satellite cell
6
SGBS preadipocytes
6
dermis blood vessel endothelial cell
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
fibroblast of lung
6
glutamatergic neuron
6
pancreatic acinar cell
6
pancreatic ductal cell
6
skeletal muscle myoblast
5
HeLa-S3
5
SK-N-DZ
5
WI38
5
bronchial epithelial cell
5
chondrocyte
5
epithelial cell of prostate
5
erythroblast
5
foreskin melanocyte
5
glomerular visceral epithelial cell
5
inhibitory neuron
5
keratinocyte
5
kidney tubule cell
5
mammary gland epithelial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
pancreatic delta cell
5
skeletal muscle fiber
5
skin fibroblast
4
22Rv1
4
HEK293
4
HepG2
4
SK-N-SH
4
T-cell
4
choroid plexus epithelial cell
4
colon epithelial cell
4
endodermal cell
4
fibroblast of breast
4
fibroblast of dermis
4
glomerular endothelial cell
4
hepatic stellate cell
4
kidney glomerular epithelial cell
4
mammary epithelial cell
4
memory B cell
4
mesodermal cell
4
myoepithelial cell of mammary gland
4
neural cell
4
neuron
4
neutrophil
4
peripheral blood mononuclear cell
4
renal cortical epithelial cell
4
type II pneumocyte
3
cardiac fibroblast
3
A172
3
ACHN
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caki2
3
Daoy
3
GM04503
3
GM04504
3
GM06990
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12878
3
GM23248
3
H4
3
HAP-1
3
HL-60
3
HT-29
3
HUES6
3
IMR-90
3
KBM-7
3
L1-S8
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
M059J
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-3
3
PC-9
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
3
SJCRH30
3
SJSA1
3
SK-N-MC
3
SW480
3
T47D
3
WERI-Rb-1
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
bipolar neuron
3
brain microvascular endothelial cell
3
brain pericyte
3
cardiac fibroblast
3
cortical cell of adrenal gland
3
dermis microvascular lymphatic vessel endothelial cell
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of proximal tubule
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
gabaergic neuron
3
immortal human breast epithelial cell line cell
3
iris pigment epithelial cell
3
kidney epithelial cell
3
luminal epithelial cell of mammary gland
3
lung microvascular endothelial cell
3
mesendoderm
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuronal stem cell
3
non-pigmented ciliary epithelial cell
3
pulmonary artery endothelial cell
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
A673
2
ACC112
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
C4-2B
2
CD4-positive helper T cell
2
Caco-2 cell
2
DND-41
2
DOHH2
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM03348
2
GM08714
2
GM12875
2
GM13976
2
GM13977
2
GM18507
Organ
4
kidney
Life stage
3
embryonic
Date released
2
February, 2021
1
June, 2020
1
September, 2022
Software used
2
encode-ccres
1
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
tissue
Showing 4 of 4 results
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Download
FileSet
DSR905RCW
released
Annotation file set
: Candidate regulatory elements for BSS00526 HEK293 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329YQT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HEK293
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR857JQR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HEK293
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR837LJK
released
Annotation file set
: Accessible chromatin annotation for Kidney 293 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP