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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
37
candidate regulatory elements
21
chromatin state
20
target gene predictions
5
accessible chromatin
2
variant allelic effects
1
binding sites
1
histone modifications
0
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
DNase-seq
1
ATAC-seq
Available data
5
bed bed3+
3
bigWig
tsv
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
23
retina
20
pigmented layer of retina
17
endothelial cell
16
fibroblast
16
monocyte
13
excitatory neuron
13
macrophage
12
hepatocyte
10
kidney
10
neural progenitor cell
10
pericyte cell
10
smooth muscle cell
9
islet of Langerhans
9
pancreatic beta cell
9
pancreatic ductal cell
9
retinal pigment epithelial cell
8
EndoC_BH1
8
astrocyte
8
pancreatic acinar cell
8
pancreatic alpha cell
7
T cell
7
adipocyte
7
skeletal muscle fiber
7
skeletal muscle satellite cell
6
B cell
6
SGBS preadipocytes
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
pancreatic delta cell
5
chondrocyte
5
erythroblast
5
heart
5
inhibitory neuron
5
osteoblast
5
pancreas
5
pancreatic stellate cell
4
fibroblast of cardiac tissue
4
glomerular visceral epithelial cell
4
liver
4
mesenchymal stem cell
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
3
cardiac fibroblast
3
CD8-positive, alpha-beta T cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
glial cell
3
glomerular endothelial cell
3
heart left ventricle
3
hepatic stellate cell
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
leukocyte
3
mesangial cell
3
natural killer cell
3
pancreatic polypeptide-secreting cell
3
regulatory T cell
3
renal cortical epithelial cell
3
right atrium auricular region
3
skeletal muscle myoblast
3
skin fibroblast
3
stomach
3
tibial artery
3
tibial nerve
3
type I pneumocyte
2
Ammon's horn
2
CD4-positive helper T cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle cell
2
caudate nucleus
2
choroid plexus epithelial cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of proximal tubule
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
frontal cortex
2
globus pallidus
2
keratinocyte
2
kidney epithelial cell
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
medulla oblongata
2
megakaryocyte
2
memory B cell
2
mesothelial cell
2
midbrain
2
muscle of leg
2
neural cell
2
neuron
2
occipital lobe
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
omental fat pad
2
pons
2
putamen
2
renal pelvis
2
schwann cell
2
smooth muscle cell of the coronary artery
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
subcutaneous adipose tissue
2
superior temporal gyrus
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H1-hESC
1
H4
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HGF
1
HL-60
1
HT-29
1
HUES6
1
HUES8
1
HeLa cell
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
IMR-90
1
Ishikawa
1
Jurkat
1
K562
1
KARPAS-422 cell
1
KBM-7
1
Kasumi-1
1
L-1236 cell
Organ
5
heart
Life stage
1
adult
1
child
1
embryonic
Date released
2
January, 2020
2
June, 2020
1
November, 2019
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
tsv
Showing 5 of 5 results
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Download
FileSet
DSR405HBQ
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular Heart from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR763PMQ
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Fetal Heart from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR270JSX
released
Annotation file set
: Accessible chromatin annotation of heart child from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR994QRK
released
Annotation file set
: Accessible chromatin annotation of heart adult from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR351NUN
released
Annotation file set
: Accessible chromatin annotation of heart
Lab:
AMP-T2D consortium
Project:
AMP