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Schema
Citing CMDGA
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Annotation type
6
binding sites
4
accessible chromatin
4
gene expression
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
7
kidney
5
hepatocyte
4
endothelial cell of hepatic sinusoid
3
endothelial cell
2
fibroblast
2
skeletal muscle fiber
2
smooth muscle cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
adipocyte
1
embryonic stem cell
1
glial cell
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
leukocyte
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mesenchymal stem cell
1
neural cell
1
neuron cell of Hypothalamus (neuron)
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
4
blood vessel
4
epithelium
4
liver
4
vasculature
Life stage
4
adult
Date released
4
February, 2024
Software used
4
macs
Lab
4
Ines Cebola, Imperial College London
Project
4
AMP
RFA
5
AMP
4
AMP2
2
ENCODE3
Showing 4 of 4 results
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FileSet
DSR573JPW
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR467GJM
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR269PNK
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR195UVD
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with basal medium.
Lab:
Ines Cebola, Imperial College London
Project:
AMP