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Schema
Citing CMDGA
Clear Filters
Annotation type
3
variant allelic effects
1
chromatin state
Annotation Category
3
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
3
DNase-seq
1
ChIP-seq
Available data
3
bed bed3+
1
bed bed9
1
bigBed bed9
File set status
3
released
1
revoked
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
3
heart
3
islet of Langerhans
3
tibial artery
3
tibial nerve
2
muscle of leg
2
coronary artery
2
heart left ventricle
2
left renal cortex interstitium
2
medulla oblongata
2
midbrain
2
right atrium auricular region
2
right kidney
2
right renal cortex interstitium
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Pancreatic islets
1
adipose tissue
1
ascending aorta
1
body of pancreas
1
brain
1
caudate nucleus
1
cerebellum (Hemisphere)
1
frontal cortex
1
globus pallidus
1
heart right ventricle
1
kidney
1
left cardiac atrium
1
left renal pelvis
1
middle frontal gyrus
1
muscle of arm
1
occipital lobe
1
pancreas
1
pons
1
putamen
1
renal cortex interstitium
1
renal pelvis
1
retina
1
right renal pelvis
1
subcutaneous adipose tissue
1
superior temporal gyrus
1
thoracic aorta
1
thymus
Organ
3
heart
1
kidney
1
ureter
Life stage
2
fetal
Date released
105
September, 2022
38
February, 2021
4
June, 2020
4
May, 2020
3
January, 2020
1
April, 2019
1
August, 2021
1
February, 2020
1
January, 2022
1
March, 2020
1
May, 2021
1
November, 2019
Software used
3
deltasvm
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR497ZOK
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney renal pelvis DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480PRT
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart child DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR799HGW
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR032VAF
revoked
Annotation file set
: ChromHMM 5-state model for heart fetal from 5 GSE63634 ChIP-seq data (very large promoter regions, revoked)
Lab:
AMP-T2D consortium
Project:
AMP