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Citing CMDGA
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Annotation type
1
chromatin state
Annotation Category
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
1
bigBed bed9
File set status
1
revoked
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
3
B cell
3
CD8-positive, alpha-beta T cell
3
monocyte
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
2
CD4-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive regulatory T cell
2
regulatory T cell
1
Pancreatic islets
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
endothelial cell of umbilical vein
1
erythroblast
1
heart
1
immature natural killer cell
1
inflammatory macrophage
1
left renal cortex interstitium
1
lymphocyte of B lineage (iPSC)
1
macrophage
1
medulla oblongata
1
megakaryocyte
1
midbrain
1
myeloid dendritic cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
plasma cell
1
plasmacytoid dendritic cell
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
1
thymus
1
tibial artery
1
tibial nerve
Organ
1
heart
Life stage
1
fetal
Date released
57
September, 2022
21
February, 2021
2
January, 2020
2
June, 2020
1
April, 2019
1
August, 2021
1
February, 2020
1
March, 2020
1
May, 2020
1
November, 2019
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_category!
Genetic variant effects
Showing 1 of 1 results
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Download
FileSet
DSR032VAF
revoked
Annotation file set
: ChromHMM 5-state model for heart fetal from 5 GSE63634 ChIP-seq data (very large promoter regions, revoked)
Lab:
AMP-T2D consortium
Project:
AMP