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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
variant allelic effects
2
eQTL
Annotation Category
115
cis-regulatory elements
35
Target gene links
5
Genetic variant effects
3
Gene expression levels
Annotation type Category
3
DNase-seq
2
RNA-seq
Available data
3
bed bed3+
File set status
5
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
14
islet of Langerhans
11
macrophage
8
fibroblast
6
lymphoblastoid cell line
5
endothelial cell
5
liver
4
T cell
4
coronary artery
4
smooth muscle cell
3
adipose tissue
3
blood cell
3
brain
3
enterocyte
3
monocyte
3
myofibroblast cell
3
right atrium auricular region
3
skin of body
3
tibial artery
2
muscle of leg
2
CD4-positive helper T cell
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Schwann cell
2
basal cell
2
cardiac muscle cell
2
epithelial cell of esophagus
2
frontal cortex
2
goblet cell
2
heart
2
heart left ventricle
2
hepatocyte
2
iPSC derived cell line
2
kidney
2
mesenchymal stem cell
2
muscle
2
putamen
2
regulatory T cell
2
skeletal muscle fiber
2
subcutaneous adipose tissue
2
substantia nigra
2
tibial nerve
2
tissue
2
type I muscle cell
2
type II muscle cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
Satellite Cells, Skeletal Muscle
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain pericyte
1
breast
1
bronchial goblet cell
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
caudate nucleus
1
cerebellar hemisphere
1
cerebellum
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
colon sigmoid
1
cortex
1
cortex of kidney
1
cortical cell of adrenal gland
1
dorsolateral prefrontal cortex
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
fibroblast of the aortic adventitia
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
heart right ventricle
1
helper T cell
1
hypothalamus
1
keratinocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
layer of hippocampus
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
luminal epithelial cell of prostatic duct
1
lung
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
microglial cell
1
minor salivary gland
1
muscle of arm
1
naive B cel
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
nucleus accumbens
1
occipital lobe
1
ovary
1
pancreas
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
parietal cell
1
peptic cell
1
pituitary gland
1
placenta
1
prostate gland
1
purified protein and synthetic DNA oligo binding assay
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
sensory neuron
1
skeletal muscle cell
1
skeletal muscle myoblast
1
skeletal muscle tissue
1
small intestine
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
stomach
1
testis
1
thoracic aorta
1
thyroid follicular cell
1
thyroid gland
1
transverse colon
1
type II pneumocyte
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
3
brain
2
heart
Life stage
1
fetal
Date released
3
May, 2020
2
January, 2022
Software used
3
deltasvm
2
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
relevant_life_stage!
adult
Showing 5 of 5 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480PRT
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart child DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR799HGW
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEP
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP