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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
10
chromatin state
10
target gene predictions
1
accessible chromatin
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
119
monocyte
38
CD8-positive, alpha-beta T cell
33
neural progenitor cell
27
endothelial cell
25
hepatocyte
25
retina
20
pigmented layer of retina
19
islet of Langerhans
19
kidney
18
fibroblast
17
EndoC_BH1
17
epithelial cell of proximal tubule
16
glomerular endothelial cell
16
macrophage
16
pancreatic ductal cell
14
excitatory neuron
13
regulatory T cell
12
B cell
11
breast cancer cell
11
cardiomyocytes
11
pancreatic acinar cell
11
pancreatic beta cell
10
H1-hESC
10
T-helper 1 cell
10
astrocyte
10
endothelial cell of hepatic sinusoid
10
pancreatic alpha cell
10
pericyte cell
10
smooth muscle cell
9
Rhabdomyosarcoma
9
T-helper 17 cell
9
adipocyte
9
embryonic stem cell
9
extended pluripotent stem (EPS) cells
9
gastric cancer cell
9
heart
9
induced pluripotent stem cell
9
osteoblast
9
progenitor cell of endocrine pancreas
9
retinal pigment epithelial cell
8
T cell
8
glomerular visceral epithelial cell
8
natural killer cell
8
neuroblastoma cell
7
HepG2
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
liver
7
memory B cell
7
pancreatic delta cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
SGBS preadipocytes
6
brain
6
chondrocyte
6
fibroblast of cardiac tissue
6
gamma-delta T cell
6
glutamatergic neuron
6
hESC cell
6
hepatic stellate cell
6
liposarcoma
6
mesangial cell
6
skeletal muscle fiber
6
skeletal muscle satellite cell
5
T-cell acute lymphoblastic leukemia
5
T-helper 2 cell
5
adipose tissue
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
erythroblast
5
heart left ventricle
5
inhibitory neuron
5
keratinocyte
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
melanoma cell
5
mesenchymal stem cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
neuroblastoma cell line
5
pancreas
5
stomach
5
subcutaneous adipose tissue
4
Rh-4 cell
4
T follicular helper cell
4
acute myeloid leukemia
4
acute myeloid leukemia cell
4
bone tissue
4
cardiac muscle cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
cerebellum
4
coronary artery
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
frontal cortex
4
glial cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
lymphoblastoid cell line
4
mammary epithelial cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
nephron progenitor
4
neuronal stem cell
4
occipital lobe
4
omental fat pad
4
osteosarcoma
4
pancreatic stellate cell
4
skeletal muscle myoblast
4
squamous cell lung carcinoma
4
tibial nerve
3
cardiac fibroblast
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Ammon's horn
3
B Cell
3
B-lymphocyte
3
CD4-positive helper T cell
3
COLO205
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Ewing sarcoma
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Jurkat
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
MCF-7
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
RS4-11 cell
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
Th1 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adipose-derived stem cell
3
adult endothelial progenitor cell
3
aortic endothelial cell
3
bone marrow cell
3
bronchial epithelial cell
3
choroid plexus epithelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
diffuse large B-cell lymphoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
erythroid cell
3
esophageal squamous cell carcinoma
3
foreskin fibroblast
3
gabaergic neuron
3
glioblastoma cell
Date released
1
February, 2021
1
June, 2020
1
May, 2021
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
pons
Showing 3 of 3 results
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Download
FileSet
DSR782OVI
released
Annotation file set
: Gene expression annotation of multipotent stem cell_multipotent cardiac progenitor (MCP) PDGFRA+ISL1+ on day 3 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383WGV
released
Annotation file set
: Histone modifications annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP