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Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
gene expression
1
histone modifications
1
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
2
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
cell line
Biosample term
37
heart
33
muscle of arm
30
brain
30
lung
29
stomach
28
muscle of back
27
large intestine
27
muscle of leg
27
placenta
26
kidney
26
left lung
25
small intestine
22
right lung
21
thymus
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
16
adrenal gland
16
spinal cord
12
foreskin keratinocyte
11
CD4-positive, alpha-beta memory T cell
11
foreskin fibroblast
9
breast cancer cell
9
cardiac muscle cell
9
neural progenitor cell
9
trophoblast cell
8
chorionic villus
8
endothelial cell of umbilical vein
8
muscle of trunk
7
H9
7
common myeloid progenitor, CD34-positive
7
keratinocyte
7
melanoma
7
neurosphere
7
retina
6
bronchial epithelial cell
6
fibroblast cell line
6
heart left ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
right renal pelvis
5
22Rv1
5
HEK293
5
HepG2
5
SK-N-SH
5
T-helper 17 cell
5
WI38
5
endodermal cell
5
epithelial cell of prostate
5
fibroblast of lung
5
foreskin melanocyte
5
liver
5
mammary epithelial cell
5
mesodermal cell
5
neuronal stem cell
5
osteoblast
5
prostate cancer cell line
5
right renal cortex interstitium
5
spleen
5
trophoblast
4
GM06990
4
GM08714
4
GM12864
4
GM12865
4
IMR-90
4
SK-N-DZ
4
SK-N-MC
4
WERI-Rb-1
4
choroid plexus epithelial cell
4
eye
4
fibroblast of mammary gland
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glioblastoma multiforme cancer stem cell
4
heart right ventricle
4
hepatocyte
4
neuroblastoma cell
4
neutrophil
4
retinal pigment epithelial cell
4
skeletal muscle myoblast
4
testis
4
tongue
3
AG04449 cell
3
AG04450 cell
3
B cell
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta memory T cell
3
CMK
3
Daoy
3
GM12801
3
GM12873
3
GM12874
3
GM12875
3
GM12891
3
GM12892
3
H1-hESC
3
HUES6
3
HUES64
3
MCF-7
3
MG63
3
NAMALWA cell
3
NT2-D1 cell
3
PC-9
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
adipocyte
3
cardiac fibroblast
3
chorion membrane
3
dermal fibroblast
3
dermis blood vessel endothelial cell
3
dermis lymphatic vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
ectodermal cell
3
embryonic stem cell
3
epithelial cell of proximal tubule
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
hematopoietic multipotent progenitor cell
3
limb
3
liposarcoma
3
lung microvascular endothelial cell
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
mesendoderm
3
mononuclear cell
3
myotube
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neural cell
3
pulmonary artery endothelial cell
3
regulatory T cell
3
skin fibroblast
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A549
2
A673
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Burkitt's lymphoma
2
CD14-positive monocyte
2
COLO-320 cell
2
Caco-2 cell
2
DND-41
2
DND-41 cell
2
ECC-1
2
EH
2
EL
2
ELF-1
2
ELR
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
G401
2
GM10248
2
GM10266
2
GM10847
2
GM12872
2
GM12878
2
GM13976
2
GM13977
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
GM20000
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293-T-REx cell
2
HFF-Myc
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HUES48
2
Jurkat
2
K562
2
KOPT-K1
2
L1-S8
2
Mantle cell lymphoma
2
NAMALWA
2
NCI-H460 cell
2
NHEK
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
Panc1
2
RKO
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
Life stage
adult
2
unknown
Date released
4
February, 2021
1
September, 2022
Software used
3
macs
1
encode-ccres
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
relevant_life_stage!
adult
Showing 5 of 5 results
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Download
FileSet
DSR993OAS
released
Annotation file set
: Candidate regulatory elements for BSS00543 hematopoietic multipotent progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR342QFZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE hematopoietic multipotent progenitor cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR818RAD
released
Annotation file set
: Binding sites annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR935WFQ
released
Annotation file set
: Binding sites annotation for Blood Burkitt_Lymphoma from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855HPA
released
Annotation file set
: Binding sites annotation for Blood Akata from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP