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Schema
Citing CMDGA
Clear Filters
Annotation type
21
candidate regulatory elements
11
chromatin state
11
target gene predictions
4
binding sites
3
accessible chromatin
2
histone modifications
1
gene expression
Annotation Category
4
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
1
RNA-seq
Available data
4
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
3
cell line
2
in vitro differentiated cells
Biosample term
17
epithelial cell of proximal tubule
16
monocyte
14
glomerular endothelial cell
14
hepatocyte
13
islet of Langerhans
12
endothelial cell
11
cardiomyocytes
11
neural progenitor cell
10
H1-hESC
10
endothelial cell of hepatic sinusoid
10
progenitor cell of endocrine pancreas
9
EndoC_BH1
9
breast cancer cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
8
kidney
8
pancreatic ductal cell
8
regulatory T cell
7
T-helper 1 cell
7
T-helper 17 cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
melanoma
6
fibroblast cell line
6
kidney interstitial cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
osteoblast
5
prostate cancer cell line
5
subcutaneous adipose tissue
4
adipose tissue
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
embryonic stem cell
4
foreskin fibroblast
4
gamma-delta T cell
4
glioblastoma multiforme cancer stem cell
4
heart
4
keratinocyte
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mammary epithelial cell
4
nephron progenitor
4
neuroblastoma cell
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
HepG2
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
MCF-7
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T-cell acute lymphoblastic leukemia
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
Tumor-derived cell line
3
Vascular Smooth Muscle Cell / Pericyte
3
acute myeloid leukemia
3
adipocyte
3
adult endothelial progenitor cell
3
cardiac muscle cell
3
central memory CD8-positive, alpha-beta T cell
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
effector memory CD8-positive, alpha-beta T cell
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
liposarcoma
3
macrophage
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuronal stem cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
skeletal muscle myoblast
3
smooth muscle cell of the coronary artery
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
B cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Jurkat
2
K562
2
Kupffer cell
2
Mantle cell lymphoma
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
Organ
1
lymph node
Date released
3
February, 2021
1
May, 2021
1
October, 2022
Software used
3
macs
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR302OYN
released
Annotation file set
: Binding sites annotation for AG04450 cell (AG04450) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR782OVI
released
Annotation file set
: Gene expression annotation of multipotent stem cell_multipotent cardiac progenitor (MCP) PDGFRA+ISL1+ on day 3 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR183QFO
released
Annotation file set
: Binding sites annotation for Lung AG04450 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR818RAD
released
Annotation file set
: Binding sites annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR225FOM
released
Annotation file set
: Binding sites annotation for Blood GM13976 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP