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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
10
chromatin state
10
target gene predictions
3
gene expression
1
accessible chromatin
1
binding sites
1
differential activity
1
eQTL
1
histone modifications
Annotation Category
3
Gene expression levels
1
Genetic variant effects
Annotation type Category
4
RNA-seq
Available data
3
tsv
File set status
4
released
Genome assembly (visualization)
1
GRCh38
Organism
4
Homo sapiens
Biosample type
3
tissue
1
in vitro differentiated cells
Biosample term
24
islet of Langerhans
19
monocyte
16
epithelial cell of proximal tubule
14
glomerular endothelial cell
13
hepatocyte
11
cardiomyocytes
11
endothelial cell
11
subcutaneous adipose tissue
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
macrophage
9
progenitor cell of endocrine pancreas
9
regulatory T cell
8
EndoC_BH1
8
H1-hESC
8
T-helper 1 cell
8
T-helper 17 cell
8
kidney
8
liver
7
adipose tissue
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
6
kidney interstitial cell
6
lymphoblastoid cell line
6
pancreatic ductal cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
4
T-helper 2 cell
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum
4
endothelial cell of hepatic sinusoid
4
frontal cortex
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
omental fat pad
4
putamen
4
right atrium auricular region
4
substantia nigra
4
tibial nerve
3
CD8-positive, alpha-beta T cell
3
S-shaped body
3
T follicular helper cell
3
adult endothelial progenitor cell
3
amygdala
3
anterior cingulate cortex
3
blood cell
3
body of pancreas
3
brain
3
caudate nucleus
3
central memory CD8-positive, alpha-beta T cell
3
coronary artery
3
effector memory CD8-positive, alpha-beta T cell
3
heart
3
hepatocyte(AFP)
3
hypothalamus
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive B cel
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
nucleus accumbens
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
skeletal muscle tissue
3
skin of body
3
smooth muscle cell
3
tibial artery
3
visceral abdominal adipose tissue
2
Ammon's horn
2
B cell
2
C1 segment of cervical spinal cord
2
Kupffer cell
2
T cell
2
adipocyte
2
adrenal gland
2
ascending aorta
2
blood
2
cerebellum (Hemisphere)
2
dorsolateral prefrontal cortex
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
fibroblast
2
gastrocnemius medialis(Muscle - Skeletal)
2
heart left ventricle
2
iPSC derived cell line
2
kidney inner medulla collecting duct intercalated cell
2
left ventricle myocardium
2
leukocyte
2
lung
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
minor salivary gland
2
muscle
2
neutrophil
2
osteoblast
2
ovary
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
renal vesicle
2
retina
2
right lobe of liver
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell of the coronary artery
2
spleen
2
stomach
2
testis
2
type I muscle cell
2
type II muscle cell
2
uterus
2
vagina
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Leydig cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
alpha-beta T cell
1
alternatively activated macrophage
1
aorta
1
aortic valve
1
astrocyte
1
bladder
1
breast
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle fibroblast
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellar hemisphere
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
cortex of kidney
1
cytotoxic T cell
1
dendritic cell
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
esophagus
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fallopian tube
1
fat cell
1
glial cell
1
heart right ventricle
1
helper T cell
1
hematopoietic multipotent progenitor cell
1
hepatic stellate cell
1
hippocampal neuron
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
Organ
3
adipose tissue
3
connective tissue
Life stage
2
adult
Date released
2
February, 2021
1
January, 2022
1
May, 2021
Software used
3
r
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR631EVX
released
Annotation file set
: adipose visceral eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR782OVI
released
Annotation file set
: Gene expression annotation of multipotent stem cell_multipotent cardiac progenitor (MCP) PDGFRA+ISL1+ on day 3 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR825KTA
released
Annotation file set
: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA_seq_Whole]
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR477UYX
released
Annotation file set
: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes of GSE110821 [RNA-Seq]
Lab:
AMP-T2D consortium
Project:
AMP