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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
bed bed3+
1
bed bed9
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
22
heart
21
brain
20
kidney
19
islet of Langerhans
16
induced pluripotent stem cell
16
lung
16
muscle of arm
15
muscle of leg
15
placenta
15
stomach
14
small intestine
13
large intestine
13
left lung
13
muscle of back
12
neural progenitor cell
11
EndoC_BH1
11
cardiomyocytes
11
right kidney
11
right lung
11
thymus
9
H1-hESC
9
adrenal gland
9
extended pluripotent stem (EPS) cells
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
liver
8
pancreatic ductal cell
8
spinal cord
7
T-helper 17 cell
7
embryonic stem cell
7
macrophage
6
CD4-positive, alpha-beta memory T cell
6
heart left ventricle
6
lymphoblastoid cell line
5
T-helper 1 cell
5
T-helper 2 cell
5
endothelial cell of umbilical vein
5
heart right ventricle
5
monocyte
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic beta cell
5
pancreatic delta cell
5
pancreatic stellate cell
5
regulatory T cell
5
trophoblast cell
4
B cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
chorionic villus
4
foreskin keratinocyte
4
muscle of trunk
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skin of body
3
CD14-positive, CD16-negative classical monocyte
3
CD8-positive, alpha-beta T cell
3
S-shaped body
3
T cell
3
T follicular helper cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
common myeloid progenitor, CD34-positive
3
effector memory CD8-positive, alpha-beta T cell
3
endothelial cell
3
glomerular endothelial cell
3
hepatocyte(AFP)
3
kidney interstitial cell
3
left renal cortex interstitium
3
memory B cell
3
naive B cel
3
neurosphere
3
neutrophil
3
pancreatic quiescent stellate cell
3
retina
3
right renal cortex interstitium
3
skeletal muscle tissue
3
smooth muscle cell
3
spleen
2
22Rv1
2
CD8-positive, alpha-beta memory T cell
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
adipocyte
2
adipose tissue
2
adipose-derived stem cell
2
alternatively activated macrophage
2
astrocyte
2
bronchial epithelial cell
2
cerebellum
2
dermis lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
eye
2
fibroblast
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
fibroblast of lung
2
foreskin fibroblast
2
frontal cortex
2
gamma-delta T cell
2
germinal matrix
2
glomerular visceral epithelial cell
2
hematopoietic multipotent progenitor cell
2
hepatocyte
2
iPSC derived cell line
2
keratinocyte
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
left cardiac atrium
2
left renal pelvis
2
leukocyte
2
limb
2
mature natural killer cell
2
mature neutrophil
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neural cell
2
osteoblast
2
ovary
2
putamen
2
renal vesicle
2
right renal pelvis
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skin fibroblast
2
substantia nigra
2
testis
2
tongue
2
trophoblast
1
A673
1
AG04449 cell
1
AG04450 cell
1
B-1a B cell
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
CD14-positive monocyte
1
CD1c-positive myeloid dendritic cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CMK
1
CWRU1
1
DG-75 cell
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12891
1
GM12892
1
GM18507
1
H7-hESC
1
H9
1
HEK293
1
HEK293T
1
HK-2 cell
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
IMR-90
1
JVM-2 cell
1
KARPAS-422 cell
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
Leydig cell
1
MG63
1
NCI-H460 cell
1
NT2-D1 cell
1
PC-9
Life stage
adult
1
unknown
Date released
1
May, 2021
1
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
relevant_life_stage!
adult
files.file_type!
bed bed3+
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR841XEM
released
Annotation file set
: Chromatin states for BSS00543 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR782OVI
released
Annotation file set
: Gene expression annotation of multipotent stem cell_multipotent cardiac progenitor (MCP) PDGFRA+ISL1+ on day 3 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP