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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ATAC-seq
1
RNA-seq
Available data
3
bed bed3+
3
bigWig
1
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
kidney
1
Adaptive / Maladaptive / Repairing Fibroblast
1
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
1
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
1
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
1
Afferent / Efferent Arteriole Endothelial Cell
1
B Cell
1
Classical Dendritic Cell
1
Connecting Tubule Cell
1
Connecting Tubule Intercalated Cell Type A
1
Connecting Tubule Principal Cell
1
Cortical Thick Ascending Limb Cell
1
Cycling Endothelial Cell
1
Cycling Epithelial Cell
1
Cycling Mononuclear Phagocyte
1
Cycling T Cell
1
Cytotoxic T Cell
1
Degenerative Connecting Tubule Cell
1
Degenerative Connecting Tubule Cell / Principal Cell
1
Degenerative Cortical Thick Ascending Limb Cell
1
Degenerative Distal Convoluted Tubule Cell
1
Degenerative Intercalated Cell Type A
1
Degenerative Peritubular Capillary Endothelial Cell
1
Degenerative Principal Cell
1
Degenerative Proximal Tubule Epithelial Cell
1
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
1
Degenerative Vascular Smooth Muscle Cell
1
Descending Thin Limb Cell Type 1
1
Distal Convoluted Tubule Cell Type 1
1
Fibroblast
1
Glomerular Capillary Endothelial Cell
1
Intercalated Cell Type A
1
Intercalated Cell Type B
1
Lymphatic Endothelial Cell
1
M2 Macrophage
1
Mast Cell
1
Medullary Thick Ascending Limb Cell
1
Mesangial Cell
1
Monocyte
1
Monocyte-derived Cell
1
Myofibroblast
1
Natural Killer T Cell
1
Natural Killer T Cell Type 1
1
Natural Killer T Cell Type 2
1
Non-Classical Monocyte
1
Parietal Epithelial Cell
1
Peritubular Capillary Endothelial Cell
1
Plasma Cell
1
Plasmacytoid Dendritic Cell
1
Podocyte
1
Principal Cell
1
Proximal Tubule Epithelial Cell Segment 1 and 2
1
Proximal Tubule Epithelial Cell Segment 3
1
Regulatory T Cell
1
Renin-positive Juxtaglomerular Granular Cell
1
T Cell
1
Transitional Principal-Intercalated Cell
1
Vascular Smooth Muscle Cell / Pericyte
Disease term
2
chronic kidney disease
2
diabetes mellitus,hypertensive disorder
2
hypertensive disorder
1
chronic kidney disease, hypertensive disorder
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
hypertensive disorder, chronic kidney disease
Organ
4
kidney
Date released
3
August, 2021
1
February, 2021
Software used
3
macs
1
r
Lab
4
Katalin Susztak, Upenn
Project
4
AMP
RFA
4
AMP2
annotation_type!
eQTL
Showing 4 of 4 results
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Download
FileSet
DSR880LWO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR772HPX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR937TUB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR514WID
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP