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Schema
Citing CMDGA
Clear Filters
Annotation type
7
accessible chromatin
7
gene expression
1
eQTL
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ATAC-seq
Available data
7
bed bed3+
7
bigWig
File set status
7
released
Genome assembly (visualization)
7
GRCh38
7
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
7
kidney
5
hepatocyte
4
endothelial cell
4
endothelial cell of hepatic sinusoid
3
macrophage
2
T cell
2
capillary endothelial cell
2
extracellular matrix secreting cell
2
fibroblast
2
natural killer cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
skeletal muscle fiber
2
smooth muscle cell
1
B cell
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
basal cell
1
ciliated cell
1
club cell
1
conventional dendritic cell
1
embryonic stem cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
erythrocyte
1
glial cell
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
leukocyte
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte
1
memory B cell
1
mesenchymal stem cell
1
monocyte
1
myofibroblast cell
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neural cell
1
neuroendocrine cell
1
neuron cell of Hypothalamus (neuron)
1
non-classical monocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
pericyte cell
1
plasmacytoid dendritic cell
1
proximal tubule cells with injury markers
1
regulatory T cell
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle satellite cell
1
stellate neuron
1
type I muscle cell
1
type I pneumocyte
1
type II muscle cell
1
type II pneumocyte
Disease term
2
diabetes mellitus,hypertensive disorder
1
chronic kidney disease
1
hypertensive disorder
1
hypertensive disorder, chronic kidney disease
Organ
7
kidney
Date released
7
August, 2021
November, 2021
Software used
7
macs
Lab
7
Katalin Susztak, Upenn
Project
7
AMP
RFA
7
AMP2
AMP
award.rfa!
AMP
month_released!
November, 2021
Showing 7 of 7 results
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Download
FileSet
DSR016ZOX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR073KQB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR880LWO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR772HPX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR307LRO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR574ZEL
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR937TUB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP