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Schema
Citing CMDGA
Clear Filters
Annotation type
16
chromatin state
7
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
Annotation Category
8
cis-regulatory elements
Annotation type Category
7
ATAC-seq
DNase-seq
1
ChIP-seq
Available data
8
bed bed3+
7
bigWig
File set status
8
released
Genome assembly (visualization)
8
hg19
7
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
22
retina
20
pigmented layer of retina
18
endothelial cell
18
fibroblast
17
monocyte
14
neural progenitor cell
13
excitatory neuron
13
macrophage
12
endothelial cell of hepatic sinusoid
10
pericyte cell
9
EndoC_BH1
9
breast cancer cell
9
embryonic stem cell
9
pancreatic ductal cell
9
retinal pigment epithelial cell
9
smooth muscle cell
8
astrocyte
8
islet of Langerhans
8
kidney
8
pancreatic beta cell
7
erythroblast
7
hepatocyte
7
melanoma
7
pancreatic acinar cell
7
pancreatic alpha cell
6
B cell
6
T cell
6
adipocyte
6
chondrocyte
6
fibroblast cell line
6
glutamatergic neuron
6
keratinocyte
5
SGBS preadipocytes
5
inhibitory neuron
5
osteoblast
5
pancreatic delta cell
5
prostate cancer cell line
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
CD8-positive, alpha-beta T cell
4
HepG2
4
cardiac muscle cell
4
foreskin fibroblast
4
glioblastoma multiforme cancer stem cell
4
liver
4
mammary epithelial cell
4
memory B cell
4
neuroblastoma cell
4
pancreatic stellate cell
4
regulatory T cell
4
type II pneumocyte
3
MCF-7
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
adipose tissue
3
adipose-derived stem cell
3
aortic endothelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
fibroblast of cardiac tissue
3
gabaergic neuron
3
glial cell
3
liposarcoma
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
neuronal stem cell
3
plasma cell
3
synovial sarcoma cell
3
triple-negative breast cancer
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
H1-hESC
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Jurkat
2
K562
2
Mantle cell lymphoma
2
Muller cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUM-185PE cell
2
T follicular helper cell
2
T-47D cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
T-lymphocyte
2
Th1 cell
2
U-87 MG
2
U2OS
2
WERI-Rb-1
2
WI-38 cell
2
adult acute myeloid leukemia
2
aortic adventitial fibroblast
2
basal cell
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
ciliated cell
2
club cell
2
colon adenocarcinoma
2
coronary artery
2
differentiating adipose-derived stem cell
2
diffuse large B-cell lymphoma
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid progenitor cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
gamma-delta T cell
2
gastric cancer cell
2
glioblastoma cell
2
heart
2
hepatic stellate cell
2
immortal neural cell line cell
2
leukemic stem cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
mast cell
Disease term
2
diabetes mellitus,hypertensive disorder
1
chronic kidney disease
1
hypertensive disorder
1
hypertensive disorder, chronic kidney disease
Organ
8
kidney
Date released
7
August, 2021
1
February, 2021
Software used
8
macs
Lab
7
Katalin Susztak, Upenn
1
AMP-T2D consortium
Project
8
AMP
RFA
7
AMP2
1
AMP
annotation_type_category!
DNase-seq
Showing 8 of 8 results
table-tab-icon
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Download
FileSet
DSR715ILK
released
Annotation file set
: Binding sites annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR016ZOX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR073KQB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR880LWO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR772HPX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR307LRO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR574ZEL
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR937TUB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP