Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
10
accessible chromatin
7
gene expression
4
candidate regulatory elements
3
chromatin state
2
histone modifications
2
target gene predictions
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
1
bigBed bed9
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
20
A549
13
common myeloid progenitor, CD34-positive
11
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
9
K562
9
breast cancer cell
8
B cell
8
MCF-7
8
embryonic stem cell
8
liver
8
mature neutrophil
7
CD8-positive, alpha-beta memory T cell
7
adipocyte
7
adipose tissue
7
endothelial cell of umbilical vein
7
keratinocyte
7
melanoma
7
mononuclear cell
6
adrenal gland
6
endothelial cell of hepatic sinusoid
6
fibroblast cell line
6
fibroblast of lung
6
foreskin fibroblast
6
heart left ventricle
6
spleen
6
stomach
5
CD14-positive, CD16-negative classical monocyte
5
HepG2
5
foreskin keratinocyte
5
islet of Langerhans
5
layer of hippocampus
5
left cardiac atrium
5
mammary epithelial cell
5
mammary gland epithelial cell
5
prostate cancer cell line
5
sigmoid colon
5
skeletal muscle myoblast
5
temporal lobe
4
CD14-positive monocyte
4
GM12878
4
HeLa-S3
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
bronchial epithelial cell
4
caudate nucleus
4
endocrine pancreas
4
erythroblast
4
fibroblast of dermis
4
gastrocnemius medialis
4
glioblastoma multiforme cancer stem cell
4
heart
4
heart right ventricle
4
kidney
4
neural progenitor cell
4
neuroblastoma cell
4
osteoblast
4
pancreas
4
prostate gland
4
psoas muscle
4
regulatory T cell
4
thyroid gland
4
tibial nerve
4
transverse colon
4
upper lobe of left lung
3
22Rv1
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD4-positive, alpha-beta T cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
HL-60
3
KARPAS-422 cell
3
NAMALWA cell
3
NT2-D1 cell
3
Peyer's patch
3
SK-N-MC
3
SK-N-SH
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
ascending aorta
3
brain
3
cardiac muscle cell
3
choroid plexus epithelial cell
3
cingulate gyrus
3
colonic mucosa
3
coronary artery
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
duodenal mucosa
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
fibroblast of cardiac tissue
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
liposarcoma
3
mesenchymal stem cell
3
mucosa of rectum
3
naive T cell
3
natural killer cell
3
neuronal stem cell
3
ovary
3
retinal pigment epithelial cell
3
right cardiac atrium
3
skeletal muscle tissue
3
small intestine
3
stomach smooth muscle
3
substantia nigra
3
synovial sarcoma cell
3
testis
3
thoracic aorta
3
tibial artery
3
triple-negative breast cancer
2
AG04449 cell
2
AG04450 cell
2
BL-2 cell
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
ESC derived cell line
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM23248
2
H1-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HK-2 cell
2
HS-SY-2 cell
2
HT-29
2
HuH-7
2
IMR-90
2
Jurkat
2
KBM-7
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NB4
2
NCI-H460 cell
2
NHEK
2
Normal Human Astrocytes
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PANC-1 cell
2
PC-3
2
PC-9
2
PFSK-1 cell
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Raji cell
2
Rh-4 cell
Organ
4
kidney
Life stage
embryonic
3
adult
Date released
2
September, 2022
1
February, 2021
1
May, 2019
Software used
3
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
DOHH-2 cell
relevant_life_stage!
embryonic
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR205PVO
released
Annotation file set
: Chromatin states for BSS01097 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR181LMN
released
Annotation file set
: Chromatin states for BSS01096 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR715ILK
released
Annotation file set
: Binding sites annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR394RHU
released
Annotation file set
: ChromHMM 12-state model for adult kidney from ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP