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Schema
Citing CMDGA
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Annotation type
29
candidate regulatory elements
14
target gene predictions
7
gene expression
2
histone modifications
1
accessible chromatin
1
binding sites
1
eQTL
1
variant allelic effects
0
chromatin state
Annotation Category
1
Genetic variant effects
Annotation type Category
1
RNA-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
17
hg19
GRCh38
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
13
islet of Langerhans
8
liver
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
subcutaneous adipose tissue
4
adipocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
adipose tissue
3
inflammatory macrophage
2
ESC derived cell line
2
articular chondrocyte
2
blood
2
cartilage tissue
2
erythroblast
2
skeletal muscle tissue
1
BL-2 cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
GM12878
1
H1-hESC
1
HepG2
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
keratinocyte
1
kidney
1
layer of hippocampus
1
mammary epithelial cell
1
mature eosinophil
1
mesenchymal stem cell
1
mid-frontal lobe
1
monocyte
1
mucosa of rectum
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neutrophil
1
omental fat pad
1
pancreas
1
progenitor cell
1
rectum smooth muscle tissue
1
renal glomerulus
1
skeletal muscle
1
skeletal muscle myoblast
1
smooth muscle cell
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
substantia nigra
1
synovial joint
1
temporal lobe
1
type I muscle cell
1
type II muscle cell
Organ
1
kidney
Date released
1
August, 2021
Software used
1
matrix-eQTL
Lab
1
Katalin Susztak, Upenn
Project
1
AMP
RFA
1
AMP2
biosample_term_name!
angular gyrus
assembly!
GRCh38
Showing 1 of 1 results
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP