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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
15
target gene predictions
8
gene expression
7
accessible chromatin
5
chromatin state
4
binding sites
4
histone modifications
1
eQTL
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
5
ChIP-seq
1
RNA-seq
Available data
5
bed bed9
5
bigBed bed9
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
22
hg19
GRCh38
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
tissue
Biosample term
13
islet of Langerhans
8
liver
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
subcutaneous adipose tissue
4
adipocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
adipose tissue
3
inflammatory macrophage
2
ESC derived cell line
2
articular chondrocyte
2
blood
2
cartilage tissue
2
erythroblast
2
skeletal muscle tissue
1
BL-2 cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
GM12878
1
H1-hESC
1
HepG2
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
keratinocyte
1
kidney
1
layer of hippocampus
1
mammary epithelial cell
1
mature eosinophil
1
mesenchymal stem cell
1
mid-frontal lobe
1
monocyte
1
mucosa of rectum
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neutrophil
1
omental fat pad
1
pancreas
1
progenitor cell
1
rectum smooth muscle tissue
1
renal glomerulus
1
skeletal muscle
1
skeletal muscle myoblast
1
smooth muscle cell
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
substantia nigra
1
synovial joint
1
temporal lobe
1
type I muscle cell
1
type II muscle cell
Organ
1
kidney
Date released
5
May, 2021
1
August, 2021
Software used
5
chromhmm
1
matrix-eQTL
Lab
5
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
6
AMP
RFA
5
AMP
1
AMP2
assembly!
GRCh38
Showing 6 of 6 results
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FileSet
DSR103NWH
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Late pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR146BON
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Early pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR622ZAP
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Gut tube cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR148OGH
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Embyonic stem cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044ECG
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Definitive endoderm cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP